RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 VRK3Q8IV63 474 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 DENND6AQ8IWF6 608 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 OTUD6BQ8N6M0 293 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 RSC1A1Q92681 617 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYNE2-214ENST00000554928 CXorf40BQ96DE9 158 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 SNF8Q96H20 258 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 C12orf66Q96MD2 445 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 SLC40A1Q9NP59 571 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 GRHL1Q9NZI5 618 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 GALPQ9UBC7 116 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 SATB2Q9UPW6 733 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 CHMP2BQ9UQN3 213 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 KNTC1P50748 2209 aa12.08□□□□□ -0.48
SYNE2-214ENST00000554928 IGHV5-10-1A0A0J9YXX1 117 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 C17orf113A0A1B0GUU1 675 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 SLC5A10A0PJK1 596 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 LILRA5A6NI73 299 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 BHMG1C9JSJ3 638 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-214ENST00000554928 BRINP1O60477 761 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 USP1O94782 785 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CPNE6O95741 557 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 PROS1P07225 676 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 SLC2A4P14672 509 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 FMO4P31512 558 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 ELK3P41970 407 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 INHBCP55103 352 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 EIF3BP55884 814 aaKnown RBP12.07□□□□□ -0.48
SYNE2-214ENST00000554928 GABREP78334 506 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 MPP1Q00013 466 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 SLC7A5Q01650 507 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CTBP1Q13363 440 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 BOP1Q14137 746 aaKnown RBP12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CRYMQ14894 314 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 LYPLAL1Q5VWZ2 237 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 DUPD1Q68J44 220 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 NEPROQ6NW34 567 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 FOXR1Q6PIV2 292 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CERS6Q6ZMG9 384 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 PCGF5Q86SE9 256 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 ANKMY2Q8IV38 441 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 TRIM48Q8IWZ4 208 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 PHC3Q8NDX5 983 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 NCSTNQ92542 709 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 ELMO1Q92556 727 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 FAM136AQ96C01 138 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CCDC74BQ96LY2 380 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 BIRC8Q96P09 236 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 EBNA1BP2Q99848 306 aaKnown RBP12.07□□□□□ -0.48
SYNE2-214ENST00000554928 ERP44Q9BS26 406 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 FBXO6Q9NRD1 293 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-214ENST00000554928 POT1Q9NUX5 634 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 ANAPC5Q9UJX4 755 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 ACSL5Q9ULC5 683 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 MRFAP1Q9Y605 127 aa12.07□□□□□ -0.48
SYNE2-214ENST00000554928 UBA6A0AVT1 1052 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ESYT3A0FGR9 886 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 FAM187AA6NFU0 413 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 PRMT5O14744 637 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 TLX3O43711 291 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 NIPSNAP2O75323 286 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 NDUFS3O75489 264 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 S1PR4O95977 384 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 SLC35G4P0C7Q5 338 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 OR56A5P0C7T3 313 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ERVK-10P10266 1014 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 PGAM1P18669 254 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ITIH1P19827 911 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 CCKBRP32239 447 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ETV5P41161 510 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 HALP42357 657 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 SLC1A2P43004 574 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ABCG1P45844 678 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 LEPRP48357 1165 aaKnown RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 TTPAP49638 278 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 SQSTM1Q13501 440 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 RTP5Q14D33 572 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 KIF26BQ2KJY2 2108 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 AARS2Q5JTZ9 985 aaKnown RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 SNAP47Q5SQN1 464 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 PHF19Q5T6S3 580 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ZNF470Q6ECI4 717 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ZNF549Q6P9A3 640 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 TRMT10BQ6PF06 316 aaKnown RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 UNC5AQ6ZN44 842 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 PIM3Q86V86 326 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 CILP2Q8IUL8 1156 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 NOA1Q8NC60 698 aaKnown RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 WDR48Q8TAF3 677 aa12.06□□□□□ -0.48
SYNE2-214ENST00000554928 ZCCHC14Q8WYQ9 949 aaKnown RBP12.06□□□□□ -0.48
SYNE2-214ENST00000554928 PMEPA1Q969W9 287 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms