RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CAMK1DQ8IU85 385 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DENND6AQ8IWF6 608 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SLC30A8Q8IWU4 369 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZZZ3Q8IYH5 903 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 STK40Q8N2I9 435 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OXR1Q8N573 874 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 BEND7Q8N7W2 519 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GPATCH11Q8N954 259 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OR4K1Q8NGD4 311 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OR56A3Q8NH54 315 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FAM110BQ8TC76 370 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CXorf40AQ8TE69 158 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TWIST2Q8WVJ9 160 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TTC9Q92623 222 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DCPSQ96C86 337 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MTERF3Q96E29 417 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CDKN2AIPNLQ96HQ2 116 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 VPS50Q96JG6 964 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FAM161BQ96MY7 647 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TSC22D3Q99576 134 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SDHCQ99643 169 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SEPT5Q99719 369 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 THTPAQ9BU02 230 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ARHGAP39Q9C0H5 1083 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 POLR2J2Q9GZM3 115 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 POLR2J3Q9H1A7 115 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 Q9H521 79 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 WDCPQ9H6R7 721 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TRPV4Q9HBA0 871 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PAK6Q9NQU5 681 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GPR27Q9NS67 375 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DLGAP2Q9P1A6 1054 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 THEGQ9P2T0 379 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PACSIN3Q9UKS6 424 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MTMR7Q9Y216 660 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ERGIC3Q9Y282 383 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PIKFYVEQ9Y2I7 2098 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 A0A087WXM4 84 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ISPDA4D126 451 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TTC34A8MYJ7 566 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TAF4O00268 1085 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CLDN5O00501 218 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 AZIN1O14977 448 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DCXO43602 365 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PRAMEF4O60810 478 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ECI2O75521 394 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TRMUO75648 421 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 EIF2S1P05198 315 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 IL6P05231 212 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HOXC4P09017 264 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 UGT1A1P22309 533 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PTX3P26022 381 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ACRV1P26436 265 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 AOAHP28039 575 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CD40LGP29965 261 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OXTRP30559 389 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 GSK3BP49841 420 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MECP2P51608 486 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CLCNKAP51800 687 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 AFF1P51825 1210 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FOXA1P55317 472 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SEC13P55735 322 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ERVPABLB-1P60509 514 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CRADDP78560 199 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PRKCDQ05655 676 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 OLIG2Q13516 323 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 C6orf136Q5SQH8 315 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PRAMEF9Q5VWM5 478 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 C12orf73Q69YU5 71 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FBXL22Q6P050 247 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZCCHC23Q6ZST2 131 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TECPR1Q7Z6L1 1165 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ATCAYQ86WG3 371 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FAM126BQ8IXS8 530 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 TCEAL8Q8IYN2 117 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SPARTQ8N0X7 666 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 BHLHE22Q8NFJ8 381 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 DYDC1Q8WWB3 177 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 EZH1Q92800 747 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF669Q96BR6 464 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 LRCH3Q96II8 777 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 RNF170Q96K19 258 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HRASLS5Q96KN8 279 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 HAUS8Q9BT25 410 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SGPP1Q9BX95 441 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 SLC12A9Q9BXP2 914 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CALN1Q9BXU9 219 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHAC1Q9H158 963 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 C11orf49Q9H6J7 331 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 PLGRKTQ9HBL7 147 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 VCX3AQ9NNX9 186 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 IARS2Q9NSE4 1012 aaKnown RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FTSJ1Q9UET6 329 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 LEF1Q9UJU2 399 aaPredicted RBP3.39□□□□□ -1.87
SEC23A-207ENST00000554615 CROTQ9UKG9 612 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ITGB1BP2Q9UKP3 347 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 FZD1Q9UP38 647 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF451Q9Y4E5 1061 aa3.39□□□□□ -1.87
SEC23A-207ENST00000554615 MYO18AQ92614 2054 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 FAM170AA1A519 330 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms