RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 ENTPD1P49961 510 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 GPM6BQ13491 265 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 APOFQ13790 326 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 METTL21CQ5VZV1 264 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 IYDQ6PHW0 289 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 LAYNQ6UX15 382 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 SNX20Q7Z614 316 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 RHEBL1Q8TAI7 183 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 HMGCLL1Q8TB92 370 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 C17orf50Q8WW18 174 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 KCNJ9Q92806 393 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 C19orf60Q96EN9 201 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 FOXD2O60548 495 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 SNX2O60749 519 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 GPC4O75487 556 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 CRCPO75575 148 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 POLR2EP19388 210 aaKnown RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 PSMA3P25788 255 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 MRPS22P82650 360 aaKnown RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 GRB7Q14451 532 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 AGKQ53H12 422 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ALDH16A1Q8IZ83 802 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 OR52B6Q8NGF0 335 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 TUBB1Q9H4B7 451 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 AKTIPQ9H8T0 292 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 POMPQ9Y244 141 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 RGSL1A5PLK6 1076 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 RFXAPO00287 272 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 CASQ2O14958 399 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 UBDO15205 165 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 HLA-EP13747 358 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ZNF7P17097 686 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 HOXB8P17481 243 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ACRV1P26436 265 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 SPAM1P38567 509 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 GDF5P43026 501 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 DHCR24Q15392 516 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 UGT3A2Q3SY77 523 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 KCTD21Q4G0X4 260 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 FRA10AC1Q70Z53 315 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ARMCX6Q7L4S7 300 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 GALNT4Q8N4A0 578 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 TWIST2Q8WVJ9 160 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 SCRN2Q96FV2 425 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ZNF385DQ9H6B1 395 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 MEAF6Q9HAF1 191 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 DUS2Q9NX74 493 aaKnown RBP11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ZNF225Q9UK10 706 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ERVW-1Q9UQF0 538 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 ITM2BQ9Y287 266 aa11.51□□□□□ -0.57
SHMT2-212ENST00000554467 PLK4O00444 970 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 AZIN1O14977 448 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 KATNA1O75449 491 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 POP4O95707 220 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CTSLP07711 333 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 ALDOCP09972 364 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 RECQLP46063 649 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 SLC6A11P48066 632 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 ATP6V0D1P61421 351 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 NFKB2Q00653 900 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 OGFRL1Q5TC84 451 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 TPRG1Q6ZUI0 275 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 USP45Q70EL2 814 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 SYVN1Q86TM6 617 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 DSELQ8IZU8 1212 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 PCDH20Q8N6Y1 951 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 PIP4K2CQ8TBX8 421 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 MAELQ96JY0 434 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CDRT15Q96T59 188 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 HGH1Q9BTY7 390 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 MRPS26Q9BYN8 205 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 YBX2Q9Y2T7 364 aaKnown RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 BRWD1Q9NSI6 2320 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 FBP2O00757 339 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CYP17A1P05093 508 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 C1SP09871 688 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 MAPK8P45983 427 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CD300CQ08708 224 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CCDC92Q53HC0 331 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-212ENST00000554467 GDPD4Q6W3E5 623 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CACUL1Q86Y37 369 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 RBFAQ8N0V3 343 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 NXPE1Q8N323 547 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 ICA1LQ8NDH6 482 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 DLG3Q92796 817 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CNBD2Q96M20 576 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 BTBD9Q96Q07 612 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 DHRS7Q9Y394 339 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 THRAP10827 490 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 ETV3P41162 512 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 DPP6P42658 865 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 CSNK1DP48730 415 aa11.5□□□□□ -0.57
SHMT2-212ENST00000554467 PIK3CGP48736 1102 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms