RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 AMACRQ9UHK6 382 aa4.97□□□□□ -1.61
CHD8-207ENST00000554384 EFCAB5A4FU69 1503 aa4.97□□□□□ -1.61
CHD8-207ENST00000554384 ZNF644Q9H582 1327 aaPredicted RBP4.97□□□□□ -1.61
CHD8-207ENST00000554384 SHANK2Q9UPX8 1470 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 OR5K3A6NET4 321 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 LILRA5A6NI73 299 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 H0YIN7 160 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 WDR1O75083 606 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 C22orf31O95567 290 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 GGPS1O95749 300 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 KRT19P08727 400 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 GJA1P17302 382 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 GNL1P36915 607 aaPredicted RBP4.96□□□□□ -1.62
CHD8-207ENST00000554384 MATR3P43243 847 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD8-207ENST00000554384 CCR3P51677 355 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 HNRNPKP61978 463 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD8-207ENST00000554384 SIRPAP78324 504 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 CAMK2DQ13557 499 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 GTF2H2Q13888 395 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 SLC39A14Q15043 492 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 TMEM35AQ53FP2 167 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 RAB6CQ53S08 254 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 GTF2H2CQ6P1K8 395 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD8-207ENST00000554384 C1orf52Q8N6N3 182 aaKnown RBP4.96□□□□□ -1.62
CHD8-207ENST00000554384 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
CHD8-207ENST00000554384 TC2NQ8N9U0 490 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 THAP6Q8TBB0 222 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 MAGEC3Q8TD91 643 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 NUDCD2Q8WVJ2 157 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 NXNL1Q96CM4 212 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 FAM81BQ96LP2 452 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 ZMAT2Q96NC0 199 aaKnown RBP4.96□□□□□ -1.62
CHD8-207ENST00000554384 BAG1Q99933 345 aaPredicted RBP4.96□□□□□ -1.62
CHD8-207ENST00000554384 RAB6CQ9H0N0 254 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 OPA3Q9H6K4 179 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 TCP11L1Q9NUJ3 509 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 OSER1Q9NX31 292 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 TAF1P21675 1872 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 C9orf84Q5VXU9 1444 aa4.96□□□□□ -1.62
CHD8-207ENST00000554384 ATP10AO60312 1499 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 CARMIL1Q5VZK9 1371 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 PRSS51A0A1B0GVH4 220 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 TRBC2A0A5B9 178 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 FEZF1A0PJY2 475 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 EIF3DO15371 548 aaKnown RBP eCLIP4.95□□□□□ -1.623e-6■■■■□ 21.5
CHD8-207ENST00000554384 XRCC3O43542 346 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 BMP10O95393 424 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 VPREB1P12018 145 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 CDH1P12830 882 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 POLR2CP19387 275 aaPredicted RBP4.95□□□□□ -1.62
CHD8-207ENST00000554384 THBS3P49746 956 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 FUT6P51993 359 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 CTSCP53634 463 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 SEC61A1P61619 476 aaKnown RBP4.95□□□□□ -1.62
CHD8-207ENST00000554384 FHL1Q13642 323 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 ZNF234Q14588 700 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 CBWD6Q4V339 395 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 CBWD3Q5JTY5 395 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 SPECC1Q5M775 1068 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 FAM171BQ6P995 826 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 PRSS57Q6UWY2 283 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 C16orf82Q7Z2V1 217 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 AFAP1Q8N556 730 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 LMO3Q8TAP4 145 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 DNAAF4Q8WXU2 420 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 SEMA4DQ92854 862 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 PHF21AQ96BD5 680 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 OXNAD1Q96HP4 312 aaPredicted RBP4.95□□□□□ -1.62
CHD8-207ENST00000554384 MED30Q96HR3 178 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 OR6C1Q96RD1 312 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 TMEM204Q9BSN7 226 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 SYT17Q9BSW7 474 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 WACQ9BTA9 647 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 HIPK2Q9H2X6 1198 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 RABEP2Q9H5N1 569 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 UBTD1Q9HAC8 227 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 TRPC7Q9HCX4 862 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 ZHX1Q9UKY1 873 aaPredicted RBP4.95□□□□□ -1.62
CHD8-207ENST00000554384 VDAC3Q9Y277 283 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 CPS1P31327 1500 aa4.95□□□□□ -1.62
CHD8-207ENST00000554384 ASTN2O75129 1339 aaPredicted RBP4.95□□□□□ -1.62
CHD8-207ENST00000554384 ATP10BO94823 1461 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 HECW1Q76N89 1606 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 A0A1W2PPM1 405 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 A8MXE2 369 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 LACTBL1A8MY62 500 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 TRUB2O95900 331 aaKnown RBP4.94□□□□□ -1.62
CHD8-207ENST00000554384 SNHG28P0DPA3 235 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 MYBL1P10243 752 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 SNTA1Q13424 505 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 ZNF585BQ52M93 769 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 RNASEH2BQ5TBB1 312 aaKnown RBP4.94□□□□□ -1.62
CHD8-207ENST00000554384 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHD8-207ENST00000554384 SAMD14Q8IZD0 417 aaPredicted RBP4.94□□□□□ -1.62
CHD8-207ENST00000554384 SPATA20Q8TB22 786 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 RTP4Q96DX8 246 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 CDCA5Q96FF9 252 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 TTC14Q96N46 770 aa4.94□□□□□ -1.62
CHD8-207ENST00000554384 TM6SF1Q9BZW5 370 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms