RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ZNF599Q96NL3 588 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 BBS4Q96RK4 519 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CLSTN3Q9BQT9 956 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 KIFC3Q9BVG8 833 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 KRT23Q9C075 422 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 TNMDQ9H2S6 317 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 HRH4Q9H3N8 390 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 TSPY26PQ9H489 355 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 PLK3Q9H4B4 646 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 KIF9Q9HAQ2 790 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 KLHL1Q9NR64 748 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 SPATS2LQ9NUQ6 558 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 CHCHD3Q9NX63 227 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 ZNF224Q9NZL3 707 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 OR6C3Q9NZP0 311 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 DLGAP2Q9P1A6 1054 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 NLKQ9UBE8 527 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ARMCX3Q9UH62 379 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 AMACRQ9UHK6 382 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CD207Q9UJ71 328 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 HAO1Q9UJM8 370 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CPSF3Q9UKF6 684 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 R3HDM2Q9Y2K5 976 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 KCNK7Q9Y2U2 307 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 RRP15Q9Y3B9 282 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 A0A0G2JPF8 293 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 OR2A25A4D2G3 310 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 LILRA5A6NI73 299 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 LRRC72A6NJI9 287 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 OR6C76A6NM76 312 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 HNRNPCL3B7ZW38 293 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 IFNL4K9M1U5 179 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 SCAMP1O15126 338 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ADAMDEC1O15204 470 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 MID1O15344 667 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 TXNL1O43396 289 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 STX6O43752 255 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 SLC25A17O43808 307 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 KINO60870 393 aaKnown RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 NDUFS3O75489 264 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 OR2C1O95371 312 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 C22orf31O95567 290 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 BCL10O95999 233 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 FYNP06241 537 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CHRM4P08173 479 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 SRPRAP08240 638 aaKnown RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 INHBAP08476 426 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 HNRNPCL4P0DMR1 293 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CETPP11597 493 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 SLC2A4P14672 509 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 TMEM11P17152 192 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CTPS1P17812 591 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 NR1D1P20393 614 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 HSPA4P34932 840 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 NT5C2P49902 561 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 BMXP51813 675 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 YBEYP58557 167 aaPredicted RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 DSCR10P59022 87 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 NIPAL4Q0D2K0 466 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CSTF3Q12996 717 aaKnown RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 RPA4Q13156 261 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 OASLQ15646 514 aaKnown RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 RPE65Q16518 533 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ASTE1Q2TB18 679 aaPredicted RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 COL28A1Q2UY09 1125 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ARMC4Q5T2S8 1044 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CST9LP1Q5W188 147 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 WDR73Q6P4I2 378 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 OLFM4Q6UX06 510 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ISLR2Q6UXK2 745 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ADGRA1Q86SQ6 560 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 GLRX5Q86SX6 157 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 NFE4Q86UQ8 179 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 AACSQ86V21 672 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 FAM160B2Q86V87 743 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 IQCHQ86VS3 1027 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 DENND6AQ8IWF6 608 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CPXM2Q8N436 756 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 MINDY1Q8N5J2 469 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 IQUBQ8NA54 791 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 SLC4A11Q8NBS3 891 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CAMKVQ8NCB2 501 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 C11orf65Q8NCR3 313 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 SETD9Q8NE22 299 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 PSPC1Q8WXF1 523 aaKnown RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 TANKQ92844 425 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 PTP4A1Q93096 173 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 MMABQ96EY8 250 aaPredicted RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 PGAM5Q96HS1 289 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 PPP1R13BQ96KQ4 1090 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 C16orf45Q96MC5 204 aaPredicted RBP2.25□□□□□ -2.05
SRP54-204ENST00000553923 C17orf77Q96MU5 243 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ZNF558Q96NG5 402 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 DACH2Q96NX9 599 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 ATOH8Q96SQ7 321 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 CSF3RQ99062 836 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 MGME1Q9BQP7 344 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 PI4K2AQ9BTU6 479 aa2.25□□□□□ -2.05
SRP54-204ENST00000553923 MMTAG2Q9BU76 263 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms