RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 MTA2O94776 668 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 ZBTB11O95625 1053 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 SERPING1P05155 500 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 BPIP17213 487 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 RPL10P27635 214 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 SOX5P35711 763 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 HADHAP40939 763 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 RPL26P61254 145 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 KLHL30Q0D2K2 578 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 SSPNQ14714 243 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 NCF4Q15080 339 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 SEPT7Q16181 437 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 INSCQ1MX18 579 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 HGSNATQ68CP4 663 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 CRTC3Q6UUV7 619 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 IGFL2Q6UWQ7 119 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 LRRTM4Q86VH4 590 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 SYTL1Q8IYJ3 562 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 CARFQ8N187 725 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 GPR150Q8NGU9 434 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 TM9SF4Q92544 642 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 EID2BQ96D98 161 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 FER1L6-AS2Q96M78 137 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 AGAP3Q96P47 875 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 NT5MQ9NPB1 228 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 CHST11Q9NPF2 352 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 PCSK1NQ9UHG2 260 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 NOVA2Q9UNW9 492 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 RPL26L1Q9UNX3 145 aaKnown RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 CHKBQ9Y259 395 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 DNAJC16Q9Y2G8 782 aa11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 EPN1Q9Y6I3 576 aaPredicted RBP11.08□□□□□ -0.64
SUPT16H-202ENST00000552829 C1orf232A0A0U1RR37 186 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 A0A1B0GTL3 188 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 OR5K3A6NET4 321 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 ZSCAN12O43309 604 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 AKR1B10O60218 316 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 SLC25A14O95258 325 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 CCDC175P0C221 793 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 MSL3P1P0C860 447 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 FERP16591 822 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 IDSP22304 550 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 AMPD1P23109 780 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 ARL4DP49703 201 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 EPHB1P54762 984 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 DRG2P55039 364 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 CDH6P55285 790 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 KRTAP10-9P60411 292 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 PLCL1Q15111 1095 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 PLA2G4EQ3MJ16 856 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 KHDC1Q4VXA5 237 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 PPP6R3Q5H9R7 873 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 DNTTIP2Q5QJE6 756 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 KLHL35Q6PF15 583 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 BNC2Q6ZN30 1099 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 KIAA1328Q86T90 577 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 REXO1L1PQ8IX06 675 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 PPP4R1Q8TF05 950 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 CCDC42Q96M95 316 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 WDR77Q9BQA1 342 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 DHRS4Q9BTZ2 278 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 TDRD1Q9BXT4 1180 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 HAUS4Q9H6D7 363 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 PKD2L2Q9NZM6 624 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 NFKBIL1Q9UBC1 381 aaPredicted RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 TFR2Q9UP52 801 aa11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 REXO2Q9Y3B8 237 aaKnown RBP11.07□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 UBA6A0AVT1 1052 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 POM121CA8CG34 1229 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 MASP2O00187 686 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 PRICKLE3O43900 615 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 DIAPH2O60879 1101 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 LCA5LO95447 670 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 IGHEP01854 428 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 SNRPB2P08579 225 aaKnown RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 COX6B1P14854 86 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 CAPN3P20807 821 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 CES1P23141 567 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 HTR1EP28566 365 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 MIPP30301 263 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 OTX2P32243 289 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 DCDC1P59894 354 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 OTUD4Q01804 1114 aaKnown RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 RPE65Q16518 533 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 HIF1AQ16665 826 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 PTCHD3Q3KNS1 767 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF569Q5MCW4 686 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 TMTC4Q5T4D3 741 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 B3GNTL1Q67FW5 361 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF324BQ6AW86 544 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 DCUN1D2Q6PH85 259 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF571Q7Z3V5 609 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 IRF2BP2Q7Z5L9 587 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 POLNQ7Z5Q5 900 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 MCOLN2Q8IZK6 566 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 CLEC1AQ8NC01 280 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 GPR26Q8NDV2 337 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 OR1L3Q8NH93 324 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 ARRDC2Q8TBH0 407 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms