RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 DDHD1Q8NEL9 900 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 OR4F6Q8NGB9 312 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 FGF13Q92913 245 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ARRDC3Q96B67 414 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ZNF570Q96NI8 536 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 CDK15Q96Q40 435 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ACOX2Q99424 681 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 SERPINI1Q99574 410 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 EGFL8Q99944 293 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 FAM83CQ9BQN1 747 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 SLC25A23Q9BV35 468 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 FAM83DQ9H4H8 585 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 NOL11Q9H8H0 719 aaKnown RBP11.31□□□□□ -0.6
RAB5C-208ENST00000551338 RAD18Q9NS91 495 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 DZANK1Q9NVP4 752 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 AIG1Q9NVV5 245 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 OBP2AQ9NY56 170 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 WWOXQ9NZC7 414 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 PCDHGA7Q9Y5G6 932 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 GPR45Q9Y5Y3 372 aa11.31□□□□□ -0.6
RAB5C-208ENST00000551338 COL4A2P08572 1712 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 NR5A2O00482 541 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 TRIM38O00635 465 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 GIPC1O14908 333 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 NRP2O60462 931 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 MTX2O75431 263 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 CHEK2O96017 543 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 HLA-EP13747 358 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 ATP1B2P14415 290 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 CAPN3P20807 821 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 XPAP23025 273 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 NFKBIAP25963 317 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 ZFP36L2P47974 494 aaKnown RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 PSMD8P48556 350 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 METAP1P53582 386 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 ST8SIA6P61647 398 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 AP2B1P63010 937 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 GSTA3Q16772 222 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 CMPK2Q5EBM0 449 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 PLEKHS1Q5SXH7 462 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 RNF111Q6ZNA4 994 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 MBOAT1Q6ZNC8 495 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 DET1Q7L5Y6 550 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 SPATA19Q7Z5L4 167 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 GPR149Q86SP6 731 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 RASGRP3Q8IV61 690 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 VRK3Q8IV63 474 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 SFTPA1Q8IWL2 248 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 MIER2Q8N344 545 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 SLC45A3Q96JT2 553 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 RIOK2Q9BVS4 552 aaKnown RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 MRPL1Q9BYD6 325 aaKnown RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 PBX4Q9BYU1 374 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 CD244Q9BZW8 370 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 TRPV4Q9HBA0 871 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 SDR39U1Q9NRG7 319 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-208ENST00000551338 OPTCQ9UBM4 332 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 MCM8Q9UJA3 840 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 PDE10AQ9Y233 779 aa11.3□□□□□ -0.6
RAB5C-208ENST00000551338 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 EDDM13A0A1B0GTR0 161 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 BBIP1A8MTZ0 92 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 H3BNX3 289 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 K7EPI3 171 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 PSMD11O00231 422 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 KPNA3O00505 521 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 NVLO15381 856 aaKnown RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 AP2A2O94973 939 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 PRNPP04156 253 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 CAPN1P07384 714 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 IDO1P14902 403 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 ME2P23368 584 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 HMOX2P30519 316 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 DIO3P55073 304 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 NME5P56597 212 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 CDKL1Q00532 357 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 EIF4HQ15056 248 aaKnown RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 PDGFRLQ15198 375 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 TAF11Q15544 211 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 ZNF284Q2VY69 593 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 HNRNPA1L2Q32P51 320 aaKnown RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 MMEL1Q495T6 779 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 PDCD4Q53EL6 469 aaKnown RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 FNDC3BQ53EP0 1204 aaKnown RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 CDKL4Q5MAI5 379 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 ZNF648Q5T619 568 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 NAIF1Q69YI7 327 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 METTL2BQ6P1Q9 378 aaKnown RBP11.29□□□□□ -0.6
RAB5C-208ENST00000551338 VITQ6UXI7 678 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 RNF165Q6ZSG1 346 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 Q6ZSR9 355 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 SFRP1Q8N474 314 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 PYDC1Q8WXC3 89 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 OR8D1Q8WZ84 308 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms