RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GYPCP04921 128 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 POLBP06746 335 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PRSS56P0CW18 603 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 MYBL1P10243 752 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PVRP15151 417 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PECAM1P16284 738 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 XRCC1P18887 633 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CES1P23141 567 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 KDELR1P24390 212 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 ADH6P28332 368 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CD68P34810 354 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PBX1P40424 430 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CD97P48960 835 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CLCNKAP51800 687 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TMEM115Q12893 351 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 GPS2Q13227 327 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TUBB3Q13509 450 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC9A5Q14940 896 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 RPE65Q16518 533 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 KCTD19Q17RG1 926 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PTCHD3Q3KNS1 767 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 FNBP1LQ5T0N5 605 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 KAZNQ674X7 775 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 ALG1LQ6GMV1 187 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TMEM220Q6QAJ8 160 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TMC3Q7Z5M5 1100 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 LRRTM4Q86VH4 590 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 RFX6Q8HWS3 928 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PLXDC1Q8IUK5 500 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CCDC50Q8IVM0 306 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 RHOT1Q8IXI2 618 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 NDUFAF2Q8N183 169 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM26EQ8N5C1 309 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 NIPA2Q8N8Q9 360 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM71BQ8TC56 605 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CCHCR1Q8TD31 782 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 MR1Q95460 341 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CXorf40BQ96DE9 158 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CATSPER2Q96P56 530 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TSGA13Q96PP4 275 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 RNF157Q96PX1 679 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 APOL2Q9BQE5 337 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 HERPUD2Q9BSE4 406 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TLR10Q9BXR5 811 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 B3GNT4Q9C0J1 378 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 WWP1Q9H0M0 922 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CARD9Q9H257 536 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 CHST8Q9H2A9 424 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 DEF6Q9H4E7 631 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 TRIM39Q9HCM9 518 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 IL26Q9NPH9 171 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 LHX9Q9NQ69 397 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 SPTLC3Q9NUV7 552 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 IFNKQ9P0W0 207 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 VPS18Q9P253 973 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 PLEKHB1Q9UF11 243 aaPredicted RBP6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 MYO6Q9UM54 1294 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 NENFQ9UMX5 172 aa6.69□□□□□ -1.34
PRPF40B-214ENST00000551320 ESPL1Q14674 2120 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KIR2DS5A0A0G2JLQ3 304 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 A0A0G2JNG1 304 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SYCE3A1L190 88 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CCDC78A2IDD5 438 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 LILRA5A6NI73 299 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC9B1P1A6NJY1 282 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 MKRN2OSH3BPM6 223 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KIR2DS3K7RE56 304 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 GAPDHSO14556 408 aaPredicted RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KMOO15229 486 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 HCRTR1O43613 425 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 ALOX12BO75342 701 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 RFPL1O75677 317 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 MTA2O94776 668 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 AGTP01019 485 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KRT1P04264 644 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SERPING1P05155 500 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 NELFEP18615 380 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 POLR2CP19387 275 aaPredicted RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SOX18P35713 384 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CAPZBP47756 277 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 MARCKSL1P49006 195 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CDKN1CP49918 316 aaPredicted RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KPNA2P52292 529 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PMS2P54278 862 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 ITGA1P56199 1179 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 WNT3AP56704 352 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TMPRSS15P98073 1019 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TAGLNQ01995 201 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PLAURQ03405 335 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CDK18Q07002 472 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PPIDQ08752 370 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 ABRQ12979 859 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SEPT6Q14141 434 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KIR2DS5Q14953 304 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PLCL1Q15111 1095 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CLPPQ16740 277 aaPredicted RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 HADHQ16836 314 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 FILIP1LQ4L180 1135 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SIRPB2Q5JXA9 342 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CAPRIN2Q6IMN6 1127 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms