RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 TRIM65Q6PJ69 517 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 FAM83HQ6ZRV2 1179 aaPredicted RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 SHISA6Q6ZSJ9 500 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 CDHR3Q6ZTQ4 885 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 RBM12BQ8IXT5 1001 aaKnown RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 COX4I2Q96KJ9 171 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 PWWP2AQ96N64 755 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 NUDCD1Q96RS6 583 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 DPH2Q9BQC3 489 aaPredicted RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 POLDIP3Q9BY77 421 aaKnown RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 FANCEQ9HB96 536 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 IFT80Q9P2H3 777 aaPredicted RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 A0A0J9YYE9 177 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 C17orf113A0A1B0GUU1 675 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 E7EQ34 232 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 DFFAO00273 331 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 RASAL1O95294 804 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 TRBC1P01850 177 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 PYGLP06737 847 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 TPOP07202 933 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
SNRPF-203ENST00000551316 MMP11P24347 488 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 SDC4P31431 198 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 PREPP48147 710 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 NDUFA8P51970 172 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 DGKQP52824 942 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 DMPKQ09013 629 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 SNTB1Q13884 538 aaKnown RBP12.99□□□□□ -0.33
SNRPF-203ENST00000551316 TAF3Q5VWG9 929 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 STRADAQ7RTN6 431 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 SLFN11Q7Z7L1 901 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 DOLPP1Q86YN1 238 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 TRIM59Q8IWR1 403 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 PHF10Q8WUB8 498 aaKnown RBP12.99□□□□□ -0.33
SNRPF-203ENST00000551316 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
SNRPF-203ENST00000551316 MBD6Q96DN6 1003 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 SPSB2Q99619 263 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 TSG101Q99816 390 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 TIMM29Q9BSF4 260 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 SLC7A5P2Q9GIP4 190 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 ZNF395Q9H8N7 513 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-203ENST00000551316 PTGFRNQ9P2B2 879 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 NDOR1Q9UHB4 597 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 GPN3Q9UHW5 284 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-203ENST00000551316 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 POMT2Q9UKY4 750 aa12.99□□□□□ -0.33
SNRPF-203ENST00000551316 PHF3Q92576 2039 aaKnown RBP12.98□□□□□ -0.33
SNRPF-203ENST00000551316 HOXD4P09016 255 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-203ENST00000551316 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-203ENST00000551316 SPAM1P38567 509 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 PTPN9P43378 593 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 CA9Q16790 459 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 CES4AQ5XG92 561 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 PAMR1Q6UXH9 720 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 ARCQ7LC44 396 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 LRRTM4Q86VH4 590 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 OOSP2Q86WS3 158 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 RPRMLQ8N4K4 120 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 SIRT6Q8N6T7 355 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 TMEM35BQ8NCS4 154 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 OR11G2Q8NGC1 345 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
SNRPF-203ENST00000551316 CPA5Q8WXQ8 436 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 EID2BQ96D98 161 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-203ENST00000551316 GPR137Q96N19 417 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 LMF1Q96S06 567 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 SPRTNQ9H040 489 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-203ENST00000551316 CATSPERBQ9H7T0 1116 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 TMPRSS11EQ9UL52 423 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 FZD10Q9ULW2 581 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 PPT2Q9UMR5 302 aa12.98□□□□□ -0.33
SNRPF-203ENST00000551316 ARHGAP42A6NI28 874 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 FOXO6A8MYZ6 492 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 FAM227AF5H4B4 570 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-203ENST00000551316 CCP110O43303 1012 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 ATE1O95260 518 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 CRYABP02511 175 aaKnown RBP12.97□□□□□ -0.33
SNRPF-203ENST00000551316 CDH3P22223 829 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-203ENST00000551316 SPINT3P49223 89 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 CTSCP53634 463 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 SNX16P57768 344 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 NOMO3P69849 1222 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 IL10RBQ08334 325 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 ADCY2Q08462 1091 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 CETN1Q12798 172 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 DEFB113Q30KQ7 82 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 TUBB8Q3ZCM7 444 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 IRAK1BP1Q5VVH5 260 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 CHSY3Q70JA7 882 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 COX15Q7KZN9 410 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 ZZZ3Q8IYH5 903 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms