RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SEPT7Q16181 437 aaKnown RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 HECTD2Q5U5R9 776 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 AGAP9Q5VTM2 703 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 CAPRIN2Q6IMN6 1127 aaKnown RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 ABRAXAS1Q6UWZ7 409 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 NAXDQ8IW45 347 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 KYQ8NBH2 561 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 GABPB2Q8TAK5 448 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 NETO1Q8TDF5 533 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 SETD7Q8WTS6 366 aaKnown RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 CDKL2Q92772 493 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 CAVIN3Q969G5 261 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 INSM2Q96T92 566 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 CYTH2Q99418 400 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 GPR21Q99679 349 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 RBBP8Q99708 897 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 WWP1Q9H0M0 922 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 RHOJQ9H4E5 214 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 NSMCE4AQ9NXX6 385 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 SIRPGQ9P1W8 387 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 ZNF624Q9P2J8 865 aaPredicted RBP12.78□□□□□ -0.36
RAB5C-206ENST00000550406 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 DOLKQ9UPQ8 538 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
RAB5C-206ENST00000550406 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
RAB5C-206ENST00000550406 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 A0A087WUV0 522 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 KLHL33A6NCF5 533 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 H3BMM5 538 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 SLC30A4O14863 429 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 LIN7AO14910 233 aaPredicted RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 SLCO2B1O94956 709 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 CHRM3P20309 590 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 CD9P21926 228 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 FDXRP22570 491 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 MCM3P25205 808 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 HSD17B3P37058 310 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 GP5P40197 560 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 SLC19A1P41440 591 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 MAZP56270 477 aaKnown RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 NAB1Q13506 487 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 GRTP1Q5TC63 336 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 ZCCHC8Q6NZY4 707 aaKnown RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 EMBQ6PCB8 327 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 ARL14Q8N4G2 192 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 SIDT2Q8NBJ9 832 aaKnown RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 SLC44A1Q8WWI5 657 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 MRRFQ96E11 262 aaKnown RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 VPS39Q96JC1 886 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 RMDN2Q96LZ7 410 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 PANX3Q96QZ0 392 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 DUSP23Q9BVJ7 150 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
RAB5C-206ENST00000550406 ACSL5Q9ULC5 683 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 VWA7Q9Y334 891 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 DHRS7Q9Y394 339 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 ANKRD12Q6UB98 2062 aa12.77□□□□□ -0.37
RAB5C-206ENST00000550406 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 OR52A4PA6NMU1 304 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 PDZK1P1A8MUH7 402 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 CASC3O15234 703 aaKnown RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 PPM1DO15297 605 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 WISP3O95389 354 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 LDOC1O95751 146 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 SHBGP04278 402 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 TUBBP07437 444 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 ALPPL2P10696 532 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 VCLP18206 1134 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 XRCC1P18887 633 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 ACADLP28330 430 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 HOXD11P31277 338 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 HSPA14Q0VDF9 509 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 RPA4Q13156 261 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 BOP1Q14137 746 aaKnown RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 RPE65Q16518 533 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 RSPO4Q2I0M5 234 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 C14orf28Q4W4Y0 310 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 ACSBG2Q5FVE4 666 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 TMEM207Q6UWW9 146 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 PIM3Q86V86 326 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 CEP97Q8IW35 865 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 SLC22A15Q8IZD6 547 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 SFRP1Q8N474 314 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 CD200R1Q8TD46 325 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 SLC37A2Q8TED4 501 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 DCAKDQ8WVC6 231 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 UBLCP1Q8WVY7 318 aaPredicted RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 CNDP2Q96KP4 475 aaKnown RBP12.76□□□□□ -0.37
RAB5C-206ENST00000550406 PAFAH2Q99487 392 aa12.76□□□□□ -0.37
RAB5C-206ENST00000550406 GPR22Q99680 433 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms