RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CAPRIN2Q6IMN6 1127 aaKnown RBP18.95■□□□□ 0.62
DDX54-207ENST00000550016 CCNI2Q6ZMN8 369 aaPredicted RBP18.95■□□□□ 0.62
DDX54-207ENST00000550016 RBM44Q6ZP01 1051 aaKnown RBP18.95■□□□□ 0.62
DDX54-207ENST00000550016 KCNMB4Q86W47 210 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 ANKMY2Q8IV38 441 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 GABPB2Q8TAK5 448 aaPredicted RBP18.95■□□□□ 0.62
DDX54-207ENST00000550016 ELMO1Q92556 727 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 LPGAT1Q92604 370 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 CFAP36Q96G28 342 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 DEPDC7Q96QD5 511 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 FAM167BQ9BTA0 163 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 SYNDIG1Q9H7V2 258 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 POT1Q9NUX5 634 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 KCNK4Q9NYG8 393 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 MSRB2Q9Y3D2 182 aa18.95■□□□□ 0.62
DDX54-207ENST00000550016 CASC3O15234 703 aaKnown RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 EIF3HO15372 352 aaKnown RBP eCLIP18.94■□□□□ 0.62
DDX54-207ENST00000550016 ADARP55265 1226 aaKnown RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 EIF3BP55884 814 aaKnown RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 TARDBPQ13148 414 aaKnown RBP eCLIP18.94■□□□□ 0.622e-9■■■■■ 31.7
DDX54-207ENST00000550016 CTBP1Q13363 440 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 GLE1Q53GS7 698 aaKnown RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 STEAP4Q687X5 459 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 UNC5AQ6ZN44 842 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 ZNF761Q86XN6 746 aaPredicted RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 MARCH9Q86YJ5 346 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 DENND6AQ8IWF6 608 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 RBM12BQ8IXT5 1001 aaKnown RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 UNC5BQ8IZJ1 945 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 FBXO36Q8NEA4 188 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 SEC14L1Q92503 715 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 C12orf66Q96MD2 445 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 BIRC8Q96P09 236 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 INSM2Q96T92 566 aaPredicted RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 WDR83Q9BRX9 315 aaKnown RBP18.94■□□□□ 0.62
DDX54-207ENST00000550016 OR52A5Q9H2C5 316 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 PLAC1Q9HBJ0 212 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 EPB41L5Q9HCM4 733 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 SLC40A1Q9NP59 571 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 FBXO5Q9UKT4 447 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 CRYL1Q9Y2S2 319 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 PCDHB1Q9Y5F3 818 aa18.94■□□□□ 0.62
DDX54-207ENST00000550016 IGHV1OR21-1A0A087WYE8 117 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 IQCF5A8MTL0 148 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 H3BMM5 538 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 ESR1P03372 595 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 ERVK-10P10266 1014 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 MTHFD1P11586 935 aaKnown RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 ITGB6P18564 788 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 CD1CP29017 333 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 PDHA2P29803 388 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 FMO4P31512 558 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 SLC1A2P43004 574 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 PREPP48147 710 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 CD151P48509 253 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 EPHA4P54764 986 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 GPLD1P80108 840 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 PLOD1Q02809 727 aaPredicted RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 GUCY2DQ02846 1103 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 SQSTM1Q13501 440 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 FRG1Q14331 258 aaKnown RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 FASTKD3Q14CZ7 662 aaKnown RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 BRD3Q15059 726 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 CLPPQ16740 277 aaPredicted RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 AMZ1Q400G9 498 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 ZDHHC24Q6UX98 284 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 TMEM26Q6ZUK4 368 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 ZBED8Q8IZ13 594 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 SPDYE1Q8NFV5 336 aaPredicted RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 FBXO25Q8TCJ0 367 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 CERS2Q96G23 380 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 RMDN2Q96LZ7 410 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 PANX3Q96QZ0 392 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 FOXP3Q9BZS1 431 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 IARS2Q9NSE4 1012 aaKnown RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 ATXN7L1Q9ULK2 861 aaPredicted RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 HEBP2Q9Y5Z4 205 aa18.93■□□□□ 0.62
DDX54-207ENST00000550016 CFAP20Q9Y6A4 193 aaKnown RBP18.93■□□□□ 0.62
DDX54-207ENST00000550016 PRAMEF33A0A0G2JMD5 474 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 SLC5A10A0PJK1 596 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 LILRA5A6NI73 299 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 BHMG1C9JSJ3 638 aaPredicted RBP18.92■□□□□ 0.62
DDX54-207ENST00000550016 D6RAR5 112 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 IFRD1O00458 451 aaPredicted RBP18.92■□□□□ 0.62
DDX54-207ENST00000550016 KPNA5O15131 536 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 CSO75390 466 aaKnown RBP18.92■□□□□ 0.62
DDX54-207ENST00000550016 CPNE6O95741 557 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 AOAHP28039 575 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 CCR7P32248 378 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 BOP1Q14137 746 aaKnown RBP18.92■□□□□ 0.62
DDX54-207ENST00000550016 ISXQ2M1V0 245 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 SYTL3Q4VX76 610 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 ZNF789Q5FWF6 425 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 USP53Q70EK8 1073 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 PIM3Q86V86 326 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 KRT222Q8N1A0 295 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 OR10G6Q8NH81 332 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 LKAAEAR1Q8TD35 194 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 PYROXD1Q8WU10 500 aa18.92■□□□□ 0.62
DDX54-207ENST00000550016 ZFPM2Q8WW38 1151 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms