RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ART4Q93070 314 aa15.43■□□□□ 0.06
DDX54-205ENST00000548786 TMEM159Q96B96 161 aa15.43■□□□□ 0.06
DDX54-205ENST00000548786 LINC00615Q96LM1 132 aaPredicted RBP15.43■□□□□ 0.06
DDX54-205ENST00000548786 DPYSL5Q9BPU6 564 aa15.43■□□□□ 0.06
DDX54-205ENST00000548786 COG4Q9H9E3 785 aa15.43■□□□□ 0.06
DDX54-205ENST00000548786 BFARQ9NZS9 450 aa15.43■□□□□ 0.06
DDX54-205ENST00000548786 MARCH4Q9P2E8 410 aaPredicted RBP15.43■□□□□ 0.06
DDX54-205ENST00000548786 ACSL5Q9ULC5 683 aa15.43■□□□□ 0.06
DDX54-205ENST00000548786 C9orf172C9J069 976 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 GOLGA8KD6RF30 607 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 GOLGA8TH3BQL2 631 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CAPN5O15484 640 aaPredicted RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 KIF1CO43896 1103 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 RASSF9O75901 435 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 TMEM63AO94886 807 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 TPSB2P20231 275 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 PSMA3P25788 255 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 PDHA2P29803 388 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CAPZBP47756 277 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 ARCN1P48444 511 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 SEPHS1P49903 392 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CSE1LP55060 971 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 TRA2AQ13595 282 aaKnown RBP eCLIP15.42■□□□□ 0.06
DDX54-205ENST00000548786 BOP1Q14137 746 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 KRT33BQ14525 404 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 TGIF1Q15583 401 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 TPSAB1Q15661 275 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CYP1B1Q16678 543 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CASC4Q6P4E1 433 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 NLRP9Q7RTR0 991 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 ZFAND4Q86XD8 727 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 PLXDC1Q8IUK5 500 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CPT1BQ92523 772 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CTRCQ99895 268 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 TRIM56Q9BRZ2 755 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 IL22Q9GZX6 179 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 DDX47Q9H0S4 455 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 VPS37BQ9H9H4 285 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 UCK1Q9HA47 277 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CPNE5Q9HCH3 593 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 CATSPERZQ9NTU4 200 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 SLC39A1Q9NY26 324 aa15.42■□□□□ 0.06
DDX54-205ENST00000548786 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
DDX54-205ENST00000548786 NSG1P42857 185 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 NPY2RP49146 381 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 CXADRP78310 365 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 ACVR1Q04771 509 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 ITIH4Q14624 930 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 PPP1R7Q15435 360 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 LRRC8BQ6P9F7 803 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 PDZD3Q86UT5 571 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 RBM12BQ8IXT5 1001 aaKnown RBP15.41■□□□□ 0.06
DDX54-205ENST00000548786 ELMO1Q92556 727 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 MFSD3Q96ES6 412 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 NRTNQ99748 197 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 EPB41L1Q9H4G0 881 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 ANAPC5Q9UJX4 755 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 PCDHGA7Q9Y5G6 932 aa15.41■□□□□ 0.06
DDX54-205ENST00000548786 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.41■□□□□ 0.06
DDX54-205ENST00000548786 MN1Q10571 1320 aaPredicted RBP15.41■□□□□ 0.06
DDX54-205ENST00000548786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 NVLO15381 856 aaKnown RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 CD3EAPO15446 510 aaKnown RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 AP2A2O94973 939 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 VAPBO95292 243 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 TCP1P17987 556 aaKnown RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 MLLT3P42568 568 aaPredicted RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 SRSF6Q13247 344 aaKnown RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 CLN3Q13286 438 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 ZNF658BQ4V348 819 aaPredicted RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 SYTL3Q4VX76 610 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 TMEM164Q5U3C3 297 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 BROXQ5VW32 411 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 ANKS6Q68DC2 871 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 PACS1Q6VY07 963 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 ARHGAP22Q7Z5H3 698 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 CAND1Q86VP6 1230 aaKnown RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 KLHL7Q8IXQ5 586 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 PHC3Q8NDX5 983 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 LKAAEAR1Q8TD35 194 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 GRK7Q8WTQ7 553 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 C9orf72Q96LT7 481 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 FCRL3Q96P31 734 aaPredicted RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 TAAR9Q96RI9 348 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 FERD3LQ96RJ6 166 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 TTC1Q99614 292 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 NAPGQ99747 312 aaPredicted RBP15.4■□□□□ 0.06
DDX54-205ENST00000548786 OR52A5Q9H2C5 316 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 TREX1Q9NSU2 369 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 IL1RAPL1Q9NZN1 696 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 PDP2Q9P2J9 529 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 RIMKLBQ9ULI2 386 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 NEU2Q9Y3R4 380 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 B3GALT1Q9Y5Z6 326 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 PIKFYVEQ9Y2I7 2098 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 IGSF10Q6WRI0 2623 aa15.4■□□□□ 0.06
DDX54-205ENST00000548786 KLHL33A6NCF5 533 aa15.39■□□□□ 0.05
DDX54-205ENST00000548786 OR6C74A6NCV1 312 aa15.39■□□□□ 0.05
DDX54-205ENST00000548786 IQCF5A8MTL0 148 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms