RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 MAP3K3Q99759 626 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 BAG1Q99933 345 aaPredicted RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 C19orf43Q9BQ61 176 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 ULBP3Q9BZM4 244 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 OR52A5Q9H2C5 316 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 FAM96AQ9H5X1 160 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 KIR3DX1Q9H7L2 352 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 GPN2Q9H9Y4 310 aaPredicted RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 GEMIN8Q9NWZ8 242 aaKnown RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 SLC24A2Q9UI40 661 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 RPS6KL1Q9Y6S9 549 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 PRRC2CQ9Y520 2896 aaKnown RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 KCNJ13O60928 360 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 RASSF9O75901 435 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 TJP3O95049 919 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 AMD1P17707 334 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 MSH3P20585 1137 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 ACRV1P26436 265 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 MAP4P27816 1152 aaKnown RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 MC4RP32245 332 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 ARCN1P48444 511 aaKnown RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 KPNA2P52292 529 aaKnown RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 FOXM1Q08050 763 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 TUBB3Q13509 450 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 SIX1Q15475 284 aaPredicted RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 DBN1Q16643 649 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
GCN1-204ENST00000548132 BORAQ6PGQ7 559 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 FBXO38Q6PIJ6 1188 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 PEX26Q7Z412 305 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 SNX20Q7Z614 316 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 GLIS1Q8NBF1 620 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 ZNF514Q96K75 400 aaPredicted RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 TMEM121Q9BTD3 319 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 COG4Q9H9E3 785 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 NLE1Q9NVX2 485 aaPredicted RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 CROTQ9UKG9 612 aa12.14□□□□□ -0.47
GCN1-204ENST00000548132 AAR2Q9Y312 384 aaKnown RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
GCN1-204ENST00000548132 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 NBPF19A0A087WUL8 3843 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 CCDC88CQ9P219 2028 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 OR51F1A6NGY5 319 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 C2orf81A6NN90 581 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
GCN1-204ENST00000548132 SUV39H1O43463 412 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 SPAG6O75602 509 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 AP2A1O95782 977 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 ITGALP20701 1170 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 FOXN2P32314 431 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
GCN1-204ENST00000548132 ABRQ12979 859 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 KCNAB2Q13303 367 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 POU6F1Q14863 301 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 CRTC2Q53ET0 693 aaPredicted RBP12.13□□□□□ -0.47
GCN1-204ENST00000548132 ZNF789Q5FWF6 425 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 PWWP2BQ6NUJ5 590 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 PRICKLE2Q7Z3G6 844 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 KIAA1328Q86T90 577 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 PRUNE1Q86TP1 453 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 SERPINA9Q86WD7 417 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 TAB3Q8N5C8 712 aaPredicted RBP12.13□□□□□ -0.47
GCN1-204ENST00000548132 ESX1Q8N693 406 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 ZSCAN1Q8NBB4 408 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 OR13J1Q8NGT2 312 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 TTC25Q96NG3 672 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 ADNPQ9H2P0 1102 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 LRRC40Q9H9A6 602 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 CRLS1Q9UJA2 301 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 AMFRQ9UKV5 643 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 POMT2Q9UKY4 750 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 BTRCQ9Y297 605 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 PRSS21Q9Y6M0 314 aa12.13□□□□□ -0.47
GCN1-204ENST00000548132 USP9YO00507 2555 aaPredicted RBP12.13□□□□□ -0.47
GCN1-204ENST00000548132 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 CCDC78A2IDD5 438 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 MROH6A6NGR9 719 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 STK10O94804 968 aaKnown RBP12.12□□□□□ -0.47
GCN1-204ENST00000548132 IPO7O95373 1038 aaKnown RBP12.12□□□□□ -0.47
GCN1-204ENST00000548132 CRTAMO95727 393 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 TPH1P17752 444 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 PDHA2P29803 388 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 GRIA1P42261 906 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 PREPP48147 710 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 IL11RAQ14626 422 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 PLCL1Q15111 1095 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 GPR19Q15760 415 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
GCN1-204ENST00000548132 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 CLDN19Q8N6F1 224 aa12.12□□□□□ -0.47
GCN1-204ENST00000548132 UBXN4Q92575 508 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms