RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ZNF891A8MT65 544 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CCL22O00626 93 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 PPFIA2O75334 1257 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 KATNA1O75449 491 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 SRP72O76094 671 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 KIAA0754O94854 1291 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 PRAMEF1O95521 474 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 C9P02748 559 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ANKRD34CP0C6C1 535 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 VSIG8P0DPA2 414 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TPH1P17752 444 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ITGB6P18564 788 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TCN2P20062 427 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CCR10P46092 362 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CAPZBP47756 277 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ARL4DP49703 201 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 PPP1CAP62136 330 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ABHD18Q0P651 414 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 KRT33BQ14525 404 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 IL11RAQ14626 422 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 KCNAB1Q14722 419 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 PLCL1Q15111 1095 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TAF1AQ15573 450 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 DEFB109BQ30KR1 87 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ATP1A1-AS1Q5TC04 95 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 METRNLQ641Q3 311 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 C6orf15Q6UXA7 325 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 KIAA1328Q86T90 577 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 PTRH1Q86Y79 214 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CDKL3Q8IVW4 592 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CFAP206Q8IYR0 622 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TAB3Q8N5C8 712 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 GALNT6Q8NCL4 622 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ACRBPQ8NEB7 543 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 DDHD1Q8NEL9 900 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ALG3Q92685 438 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 DCUN1D1Q96GG9 259 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 MRFAP1L1Q96HT8 127 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 SLC45A3Q96JT2 553 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF514Q96K75 400 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 INSM2Q96T92 566 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 EFHD1Q9BUP0 239 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TRIM4Q9C037 500 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 WWP1Q9H0M0 922 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 SLC25A18Q9H1K4 315 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TRIT1Q9H3H1 467 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF768Q9H5H4 540 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 HRASLS2Q9NWW9 162 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 GEMIN8Q9NWZ8 242 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 SIDT1Q9NXL6 827 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 CRLS1Q9UJA2 301 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 EFR3BQ9Y2G0 817 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 TMEM184BQ9Y519 407 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 MRPS18BQ9Y676 258 aaKnown RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 DNMT3AQ9Y6K1 912 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-211ENST00000547950 RPS6KL1Q9Y6S9 549 aa6.56□□□□□ -1.36
SCAF11-211ENST00000547950 LRRK1Q38SD2 2015 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 IGHV5-51A0A0C4DH38 117 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 UBA6A0AVT1 1052 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 OR6C74A6NCV1 312 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 GOLGA6L9A6NEM1 432 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 MGAT4DA6NG13 374 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 BTNL10A8MVZ5 291 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 TOX3O15405 576 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PJA2O43164 708 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 SUV39H1O43463 412 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 SPAG6O75602 509 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 CRTAMO95727 393 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 DLGAP3O95886 979 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 NTRK1P04629 796 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 RALBP11234 206 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 MTHFD1P11586 935 aaKnown RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ATP1B2P14415 290 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 FOLR1P15328 257 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 NELFEP18615 380 aaKnown RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 F8A1P23610 371 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ADRA1AP35348 466 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 DLSTP36957 453 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 STAT5AP42229 794 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ARCN1P48444 511 aaKnown RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 VAV2P52735 878 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 POLE2P56282 527 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 DMPKQ09013 629 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 KCNAB2Q13303 367 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PARP6Q2NL67 630 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 DENND5AQ6IQ26 1287 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ARMC6Q6NXE6 501 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 DUS1LQ6P1R4 473 aaKnown RBP6.55□□□□□ -1.36
SCAF11-211ENST00000547950 KLHL35Q6PF15 583 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 CERS6Q6ZMG9 384 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ATG14Q6ZNE5 492 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 ARHGEF18Q6ZSZ5 1173 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 MICALCLQ6ZW33 695 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 TAS2R42Q7RTR8 314 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PEX26Q7Z412 305 aa6.55□□□□□ -1.36
SCAF11-211ENST00000547950 PPP1R3BQ86XI6 285 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms