RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 GLOD4Q9HC38 313 aa8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 AGPAT4Q9NRZ5 378 aa8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 FAM153AQ9UHL3 310 aa8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 SLC5A6Q9Y289 635 aa8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 BTRCQ9Y297 605 aa8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 WDR37Q9Y2I8 494 aa8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 LUC7L2Q9Y383 392 aaKnown RBP8.9□□□□□ -0.98
AC055716.3-201ENST00000547533 PIKFYVEQ9Y2I7 2098 aa8.9□□□□□ -0.99
AC055716.3-201ENST00000547533 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 A0A087X0T9 212 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 MGAT4DA6NG13 374 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 TMEM150CB9EJG8 249 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 E7EQ34 232 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 IFRD1O00458 451 aaPredicted RBP8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 STX7O15400 261 aaKnown RBP8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 CEACAM4O75871 244 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 EPOP01588 193 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 FAM228BP0C875 321 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 HADHAP40939 763 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 ARHGAP25P42331 645 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 NR2C2P49116 596 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 PPP1CAP62136 330 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 GPS2Q13227 327 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 TFDP2Q14188 446 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 IHHQ14623 411 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 FNBP1LQ5T0N5 605 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 IRAK1BP1Q5VVH5 260 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 METRNLQ641Q3 311 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 E4F1Q66K89 784 aaPredicted RBP8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC6A19Q695T7 634 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 C11orf96Q7Z7L8 435 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 RFX6Q8HWS3 928 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC34A3Q8N130 599 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 ZADH2Q8N4Q0 377 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 FDCSPQ8NFU4 85 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 GPR150Q8NGU9 434 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 BLOC1S5Q8TDH9 187 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 LRRN4Q8WUT4 740 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 CPLX3Q8WVH0 158 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 TFB1MQ8WVM0 346 aaKnown RBP8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 LCN9Q8WX39 176 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 MOCOSQ96EN8 888 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 VAT1Q99536 393 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 CEP41Q9BYV8 373 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 WWP1Q9H0M0 922 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 SRMSQ9H3Y6 488 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 KIR3DX1Q9H7L2 352 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 C1GALT1Q9NS00 363 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 DDX56Q9NY93 547 aaKnown RBP8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC24A2Q9UI40 661 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 B3GNT3Q9Y2A9 372 aa8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.89□□□□□ -0.99
AC055716.3-201ENST00000547533 ANKUB1A6NFN9 424 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 C2orf81A6NN90 581 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 KDM1AO60341 852 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 MT-CYBP00156 380 aaPredicted RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 KRT1P04264 644 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 TPM1P09493 284 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 OTX2P32243 289 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 ITGA1P56199 1179 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 UBASH3AP57075 661 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC10A2Q12908 348 aaPredicted RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 MPP3Q13368 585 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 MRPL49Q13405 166 aaKnown RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 NFE2L1Q14494 772 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 MESDQ14696 234 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 NR1I3Q14994 352 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 NCF4Q15080 339 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 NR6A1Q15406 480 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 KHDC1Q4VXA5 237 aaKnown RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 GPRC6AQ5T6X5 926 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 HGSNATQ68CP4 663 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 SLC9A4Q6AI14 798 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 HIST2H2BCQ6DN03 193 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 ZNF517Q6ZMY9 492 aaPredicted RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 SYTL1Q8IYJ3 562 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 PLD5Q8N7P1 536 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 CNTD1Q8N815 330 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 RASGEF1AQ8N9B8 481 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 GLIS1Q8NBF1 620 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 ACVR1CQ8NER5 493 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 OR4E2Q8NGC2 313 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 OR2L2Q8NH16 312 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 SPATA22Q8NHS9 363 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 COG1Q8WTW3 980 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 HEXDCQ8WVB3 486 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 VPS50Q96JG6 964 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 TEKT5Q96M29 485 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 RUFY1Q96T51 708 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 SMAD5Q99717 465 aaKnown RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 NUDT9Q9BW91 350 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 TLR10Q9BXR5 811 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 IL26Q9NPH9 171 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 ZNHIT6Q9NWK9 470 aaKnown RBP8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 IRAK4Q9NWZ3 460 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 UBP1Q9NZI7 540 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 LUZP4Q9P127 313 aa8.88□□□□□ -0.99
AC055716.3-201ENST00000547533 KLHL8Q9P2G9 620 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms