RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 NAT14Q8WUY8 206 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 CERS2Q96G23 380 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 INSM2Q96T92 566 aaPredicted RBP14.17□□□□□ -0.14
DDX54-203ENST00000546869 DPYSL5Q9BPU6 564 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 TSPYL1Q9H0U9 437 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 LRRN3Q9H3W5 708 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 EPB41L1Q9H4G0 881 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 KLHL42Q9P2K6 505 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 FBXO5Q9UKT4 447 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 CHMP2BQ9UQN3 213 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 NEUROG3Q9Y4Z2 214 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 COMMD10Q9Y6G5 202 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 BPTFQ12830 3046 aa14.17□□□□□ -0.14
DDX54-203ENST00000546869 TRBV23OR9-2A0A075B6M9 112 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 A0A1W2PQM1 296 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 MED19A0JLT2 244 aaPredicted RBP14.16□□□□□ -0.14
DDX54-203ENST00000546869 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 GPC4O75487 556 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 MT-CO3P00414 261 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 VIPP01282 170 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 AOAHP28039 575 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 NDUFS1P28331 727 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 PBLDP30039 288 aaPredicted RBP14.16□□□□□ -0.14
DDX54-203ENST00000546869 CCR7P32248 378 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 CCL7P80098 99 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 ILF2Q12905 390 aaKnown RBP14.16□□□□□ -0.14
DDX54-203ENST00000546869 CTBP1Q13363 440 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 SEPT7Q16181 437 aaKnown RBP14.16□□□□□ -0.14
DDX54-203ENST00000546869 CTSL3PQ5NE16 218 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 PTRHD1Q6GMV3 140 aaKnown RBP14.16□□□□□ -0.14
DDX54-203ENST00000546869 CEP128Q6ZU80 1094 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 TMEM26Q6ZUK4 368 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 RELL1Q8IUW5 271 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 DENND6AQ8IWF6 608 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 OTUD6BQ8N6M0 293 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 GSDMBQ8TAX9 411 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 ASZ1Q8WWH4 475 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 ELMO1Q92556 727 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 CXorf40BQ96DE9 158 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 SLC38A3Q99624 504 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 WWP1Q9H0M0 922 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 HEBP2Q9Y5Z4 205 aa14.16□□□□□ -0.14
DDX54-203ENST00000546869 ARHGEF17Q96PE2 2063 aaPredicted RBP14.16□□□□□ -0.14
DDX54-203ENST00000546869 GOLGA4Q13439 2230 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 IGHV1OR21-1A0A087WYE8 117 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 OR52A4PA6NMU1 304 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 TMX2-CTNND1H3BSU7 103 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 IFRD1O00458 451 aaPredicted RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 SLCO2B1O94956 709 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 RPLP0P05388 317 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 SLC35G4P0C7Q5 338 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 ERVK-10P10266 1014 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 MTHFD1P11586 935 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 PKMP14618 531 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 CD9P21926 228 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 CD1CP29017 333 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 SLC1A2P43004 574 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 FOXC1Q12948 553 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 FASTKD3Q14CZ7 662 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 CCDC157Q569K6 752 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 ZNF789Q5FWF6 425 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 HP1BP3Q5SSJ5 553 aaPredicted RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 PLEKHS1Q5SXH7 462 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 TEDDM1Q5T9Z0 273 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 HES3Q5TGS1 186 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 CCNI2Q6ZMN8 369 aaPredicted RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 RBM44Q6ZP01 1051 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 ANKMY2Q8IV38 441 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 TRIM48Q8IWZ4 208 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 PALM2Q8IXS6 379 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 UNC5BQ8IZJ1 945 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 LILRA3Q8N6C8 439 aaPredicted RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 TMEM159Q96B96 161 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 GFM1Q96RP9 751 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 SCNM1Q9BWG6 230 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 SAYSD1Q9NPB0 183 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 IARS2Q9NSE4 1012 aaKnown RBP14.15□□□□□ -0.14
DDX54-203ENST00000546869 KCNK4Q9NYG8 393 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 IL1RAPL1Q9NZN1 696 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 PSMD13Q9UNM6 376 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 CLCA2Q9UQC9 943 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 CDYLQ9Y232 598 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 CRYL1Q9Y2S2 319 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 MSRB2Q9Y3D2 182 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 COLEC10Q9Y6Z7 277 aa14.15□□□□□ -0.14
DDX54-203ENST00000546869 UBA6A0AVT1 1052 aaPredicted RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 ESYT3A0FGR9 886 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 HYAL3O43820 417 aaPredicted RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 HAUS5O94927 633 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 CPNE6O95741 557 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 APOA4P06727 396 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 JUPP14923 745 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 ACADLP28330 430 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 PDHA2P29803 388 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 ALDH4A1P30038 563 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 FMO4P31512 558 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 MAGEA4P43358 317 aa14.14□□□□□ -0.15
DDX54-203ENST00000546869 CARSP49589 748 aaKnown RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 EIF3BP55884 814 aaKnown RBP14.14□□□□□ -0.15
DDX54-203ENST00000546869 OR1D5P58170 312 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms