RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 Q75L30 129 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 CEP57Q86XR8 500 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 POC1AQ8NBT0 407 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 TEKT4Q8WW24 435 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 SECISBP2LQ93073 1101 aaKnown RBP5.87□□□□□ -1.47
NPAS3-204ENST00000546849 NAF1Q96HR8 494 aaKnown RBP5.87□□□□□ -1.47
NPAS3-204ENST00000546849 ABHD8Q96I13 439 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 ZNF583Q96ND8 569 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 MS4A10Q96PG2 267 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 SERINC2Q96SA4 455 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 KIF27Q86VH2 1401 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 PRAG1Q86YV5 1406 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 ERICH3Q5RHP9 1530 aa5.87□□□□□ -1.47
NPAS3-204ENST00000546849 ZNF608Q9ULD9 1512 aaPredicted RBP5.87□□□□□ -1.47
NPAS3-204ENST00000546849 CLIP1P30622 1438 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 TCRBV21S2A2A0A5A6 115 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ASPDHA6ND91 283 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 SMTNL1A8MU46 457 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 GPR137BO60478 399 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 DKC1O60832 514 aaKnown RBP eCLIP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 H1F0P07305 194 aaKnown RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 GABRA5P31644 462 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 GAS1P54826 345 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 POU3F1Q03052 451 aaPredicted RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 TROAPQ12815 778 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ALCAMQ13740 583 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 KRT39Q6A163 491 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 KLC3Q6P597 504 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ATG9AQ7Z3C6 839 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 RBM15BQ8NDT2 890 aaKnown RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 LMO3Q8TAP4 145 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 SMPDL3BQ92485 455 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 CD101Q93033 1021 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 SPACA9Q96E40 222 aaPredicted RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ZNF582Q96NG8 517 aaPredicted RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 OR6C1Q96RD1 312 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 BAG1Q99933 345 aaPredicted RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 DDX31Q9H8H2 851 aaKnown RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 UPF2Q9HAU5 1272 aaKnown RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 DPP3Q9NY33 737 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 GDE1Q9NZC3 331 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ANAPC2Q9UJX6 822 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 WBP11Q9Y2W2 641 aaKnown RBP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ZNF711Q9Y462 761 aa5.86□□□□□ -1.47
NPAS3-204ENST00000546849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.86□□□□□ -1.47
NPAS3-204ENST00000546849 ABCC8Q09428 1581 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 VPS8Q8N3P4 1428 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 C16orf97H3BN30 126 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 LDB3O75112 727 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PDE9AO76083 593 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PPP1R3DO95685 299 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 LIPFP07098 398 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PFKFB1P16118 471 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 HOXA1P49639 335 aaPredicted RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CSE1LP55060 971 aaKnown RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CDH13P55290 713 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 KRTAP10-11P60412 298 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 RPS18P62269 152 aaKnown RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PITX1P78337 314 aaPredicted RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CDK3Q00526 305 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 IL11RAQ14626 422 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PSMD6Q15008 389 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CBWD6Q4V339 395 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CBWD3Q5JTY5 395 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 SIRPB2Q5JXA9 342 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 C6orf163Q5TEZ5 329 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CAMKMTQ7Z624 323 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 NAGSQ8N159 534 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 TC2NQ8N9U0 490 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PPFIBP2Q8ND30 876 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PAPD5Q8NDF8 572 aaKnown RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 OR13A1Q8NGR1 328 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 EXD1Q8NHP7 514 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 ZFAND2BQ8WV99 257 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 SORCS1Q8WY21 1168 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PGAP3Q96FM1 320 aaPredicted RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 SEPHS2Q99611 448 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 LRRC1Q9BTT6 524 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 GOLPH3LQ9H4A5 285 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 CCDC177Q9NQR7 707 aaPredicted RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 SLC24A2Q9UI40 661 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 FAF1Q9UNN5 650 aaPredicted RBP5.85□□□□□ -1.47
NPAS3-204ENST00000546849 TOP2BQ02880 1626 aa5.85□□□□□ -1.47
NPAS3-204ENST00000546849 PRSS51A0A1B0GVH4 220 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 MED19A0JLT2 244 aaPredicted RBP5.84□□□□□ -1.47
NPAS3-204ENST00000546849 TSPY2A6NKD2 308 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 PRAC2D3DTV9 90 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 CAPN9O14815 690 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 BUB3O43684 328 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 LDLRP01130 860 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 ATP1A1P05023 1023 aaKnown RBP5.84□□□□□ -1.47
NPAS3-204ENST00000546849 TFAP2AP05549 437 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 TSPY3P0CV98 308 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 TSPY8P0CW00 308 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 CSF2RAP15509 400 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 AMD1P17707 334 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 CPT2P23786 658 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 CCR3P51677 355 aa5.84□□□□□ -1.47
NPAS3-204ENST00000546849 FUT6P51993 359 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms