RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 DCUN1D1Q96GG9 259 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 LGR4Q9BXB1 951 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 SFXN1Q9H9B4 322 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 STK39Q9UEW8 545 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 PLAGL1Q9UM63 463 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 OR1A2Q9Y585 309 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 ANGPTL3Q9Y5C1 460 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 ASPMQ8IZT6 3477 aa11.75□□□□□ -0.53
CCDC38-202ENST00000546386 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 KAT7O95251 611 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ATP1B2P14415 290 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 HOXA9P31269 272 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 POLR2LP62875 67 aaKnown RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ART3Q13508 389 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 RUNX3Q13761 415 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 DDX39BQ13838 428 aaKnown RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CYP2R1Q6VVX0 501 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 IFNEQ86WN2 208 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 TRAPPC5Q8IUR0 188 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CLYBLQ8N0X4 340 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 L3HYPDHQ96EM0 354 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MED8Q96G25 268 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MCCC1Q96RQ3 725 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 FAM129BQ96TA1 746 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CPEB1Q9BZB8 566 aaKnown RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 RETREG1Q9H6L5 497 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 SPATS2LQ9NUQ6 558 aaKnown RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PPM1HQ9ULR3 514 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 SLC8A2Q9UPR5 921 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 LOC730098B7Z3J9 87 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PSMD12O00232 456 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 FBP2O00757 339 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 OR7A17O14581 309 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MID1O15344 667 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 LZTS3O60299 673 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 H2AFYO75367 372 aaKnown RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PAK4O96013 591 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ASGR2P07307 311 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MSH3P20585 1137 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 NSG1P42857 185 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MAPK8P45983 427 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 THOP1P52888 689 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CNTN1Q12860 1018 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PRKG2Q13237 762 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 RPS6KA2Q15349 733 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 TMEM220Q6QAJ8 160 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 UBE2R2Q712K3 238 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MILR1Q7Z6M3 343 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 GALNT7Q86SF2 657 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 TERB1Q8NA31 727 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 RHEBL1Q8TAI7 183 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 FAM110BQ8TC76 370 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 NRG4Q8WWG1 115 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CCDC126Q96EE4 140 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ZNF641Q96N77 438 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 KLQ9UEF7 1012 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PDE10AQ9Y233 779 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 SLC22A14Q9Y267 594 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 A0A1W2PP55 124 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 SLC9A3R1O14745 358 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 GIPC1O14908 333 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PSMC3P17980 439 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 EFNA1P20827 205 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 BDKRB1P46663 353 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 HK2P52789 917 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 UFM1P61960 85 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MS4A2Q01362 244 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 GTF2H2Q13888 395 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 KCNC3Q14003 757 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PREPLQ4J6C6 727 aaPredicted RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 GTF2H2CQ6P1K8 395 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 LARP4Q71RC2 724 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 FUNDC1Q8IVP5 155 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 CFAP206Q8IYR0 622 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 FNDC5Q8NAU1 212 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 PHC3Q8NDX5 983 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 SUSD6Q92537 303 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
CCDC38-202ENST00000546386 TMEM79Q9BSE2 394 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ACAT2Q9BWD1 397 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 ZDHHC3Q9NYG2 299 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 MOSPD1Q9UJG1 213 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 USP22Q9UPT9 525 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 V9GYQ6 96 aa11.74□□□□□ -0.53
CCDC38-202ENST00000546386 HELZP42694 1942 aaKnown RBP11.73□□□□□ -0.53
CCDC38-202ENST00000546386 SCN8AQ9UQD0 1980 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 IGLON5A6NGN9 336 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 TM7SF2O76062 418 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 NFATC1O95644 943 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 PCCBP05166 539 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 XRCC1P18887 633 aaPredicted RBP11.73□□□□□ -0.53
CCDC38-202ENST00000546386 VIPR1P32241 457 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 PTDSS1P48651 473 aaKnown RBP11.73□□□□□ -0.53
CCDC38-202ENST00000546386 ATP6V0D1P61421 351 aa11.73□□□□□ -0.53
CCDC38-202ENST00000546386 TMEM115Q12893 351 aaPredicted RBP11.73□□□□□ -0.53
CCDC38-202ENST00000546386 PTGR1Q14914 329 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms