RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CAB39Q9Y376 341 aaPredicted RBP8.5□□□□□ -1.05
CLIP1-218ENST00000545889 LYVE1Q9Y5Y7 322 aa8.5□□□□□ -1.05
CLIP1-218ENST00000545889 CCDC154A6NI56 674 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 GRXCR1A8MXD5 290 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 SLC28A1O00337 649 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 OTCP00480 354 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 BMP7P18075 431 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ITPKAP23677 461 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NDUFS1P28331 727 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 BMPR1AP36894 532 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ENTPD1P49961 510 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 AQP5P55064 265 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 GBE1Q04446 702 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 EMC10Q5UCC4 262 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 TPRG1Q6ZUI0 275 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 GPRIN1Q7Z2K8 1008 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 OR52L1Q8NGH7 329 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 OR52K2Q8NGK3 314 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 SLC22A18Q96BI1 424 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RNFT2Q96EX2 444 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 COMMD8Q9NX08 183 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CYP8B1Q9UNU6 501 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 BCLAF3A2AJT9 711 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 MTMR11A4FU01 709 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 IQCF5A8MTL0 148 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 WNT9AO14904 365 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 FOXD2O60548 495 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 UBXN7O94888 489 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 PRAMEF1O95521 474 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 MLYCDO95822 493 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NELFEP18615 380 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NAGLUP54802 743 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 MANFP55145 182 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 WDR5P61964 334 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 GSTM4Q03013 218 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RGS21Q2M5E4 152 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NADK2Q4G0N4 442 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CARD16Q5EG05 197 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 LRRC73Q5JTD7 316 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RIPOR1Q6ZS17 1223 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ADCK1Q86TW2 530 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ZC3H7AQ8IWR0 971 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 Q8N9G6 341 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 BRSK1Q8TDC3 778 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NEK7Q8TDX7 302 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 TMEM125Q96AQ2 219 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CERS2Q96G23 380 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CLPTM1LQ96KA5 538 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 TAPBPLQ9BX59 468 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CADM1Q9BY67 442 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 HEMK1Q9Y5R4 338 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 H0YGN5 161 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 KLF8O95600 359 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 SERPINE1P05121 402 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 PKMP14618 531 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 SLC13A2Q13183 592 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 DSC3Q14574 896 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RAB6CQ53S08 254 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 TAS1R1Q7RTX1 841 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 HMCESQ96FZ2 354 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 PWWP2AQ96N64 755 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NDC1Q9BTX1 674 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RNF38Q9H0F5 515 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RAB6CQ9H0N0 254 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 OR2AG1Q9H205 316 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ELAC1Q9H777 363 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CCDC177Q9NQR7 707 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 PCDHB1Q9Y5F3 818 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 NFS1Q9Y697 457 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 EDDM13A0A1B0GTR0 161 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 GSC2O15499 205 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 IRAK2O43187 625 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RIPK2O43353 540 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CLEC3AO75596 197 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 LRIG2O94898 1065 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 MFN2O95140 757 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RHOP08100 348 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 STT3AP46977 705 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 RPP38P78345 283 aaKnown RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 TEX44Q53QW1 395 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 AHI1Q8N157 1196 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 FAR1Q8WVX9 515 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 P2RY11Q96G91 374 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 KCTD14Q9BQ13 255 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ATG10Q9H0Y0 220 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 EHD1Q9H4M9 534 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CCSER2Q9H7U1 834 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 MARCH7Q9H992 704 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 EQTNQ9NQ60 294 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 MTRRQ9UBK8 725 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 ENOPH1Q9UHY7 261 aa8.49□□□□□ -1.05
CLIP1-218ENST00000545889 CDK4P11802 303 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 TYRP14679 529 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 ENDOUP21128 410 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 RPL22P35268 128 aaKnown RBP8.48□□□□□ -1.05
CLIP1-218ENST00000545889 FOLH1Q04609 750 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 GPR17Q13304 367 aa8.48□□□□□ -1.05
CLIP1-218ENST00000545889 CTBP1Q13363 440 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms