RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 FOPNLQ96NB1 174 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 TFB2MQ9H5Q4 396 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 CNOT10Q9H9A5 744 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 CAB39LQ9H9S4 337 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 CYP4F12Q9HCS2 524 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 PCMTD2Q9NV79 361 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 ZNHIT2Q9UHR6 403 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 PCOLCE2Q9UKZ9 415 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 TMCO1Q9UM00 188 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 CA5BQ9Y2D0 317 aa15.72■□□□□ 0.11
PRPF40A-212ENST00000545856 MUC6Q6W4X9 2439 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 OR5K4A6NMS3 321 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 PHGDHO43175 533 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 TYROBPO43914 113 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 WNT1P04628 370 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 C8GP07360 202 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 CCDC166P0CW27 439 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 BRAFP15056 766 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 SAT1P21673 171 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 IDSP22304 550 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 CTSKP43235 329 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 GNPDA1P46926 289 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 RXRGP48443 463 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 ARRB1P49407 418 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 MAGOHP61326 146 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 EIF2B5Q13144 721 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 BOP1Q14137 746 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 ELOCQ15369 112 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 TTMPQ5BVD1 217 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 CDKL4Q5MAI5 379 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 ZNF648Q5T619 568 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 LAIR1Q6GTX8 287 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 SLC23A3Q6PIS1 610 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 CRTC3Q6UUV7 619 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 UNC5DQ6UXZ4 953 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 MICALCLQ6ZW33 695 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 PHACTR4Q8IZ21 702 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 CENPLQ8N0S6 344 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 PNPLA1Q8N8W4 532 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 SIDT2Q8NBJ9 832 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 FBXO15Q8NCQ5 510 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 ACVR1CQ8NER5 493 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 RDH11Q8TC12 318 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 LKAAEAR1Q8TD35 194 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 GPBAR1Q8TDU6 330 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 ARL8AQ96BM9 186 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 LRFN3Q9BTN0 628 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 VPS11Q9H270 941 aa15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 SARS2Q9NP81 518 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-212ENST00000545856 ARHGEF17Q96PE2 2063 aaPredicted RBP15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 CABIN1Q9Y6J0 2220 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 A0A1W2PPM1 405 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 SYCE1LA8MT33 242 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 IQCF5A8MTL0 148 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 TSPAN12O95859 305 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 MAOBP27338 520 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 HSPA14Q0VDF9 509 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 LVRNQ6Q4G3 990 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 ARMCX6Q7L4S7 300 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 PDZD3Q86UT5 571 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 PIM3Q86V86 326 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 KRT222Q8N1A0 295 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 DEFB119Q8N690 84 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 STAG3L4Q8TBR4 150 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 MAGEC3Q8TD91 643 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 KIAA1191Q96A73 305 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 LINGO1Q96FE5 620 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 MRPL57Q9BQC6 102 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 MRPL46Q9H2W6 279 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 SPASTQ9UBP0 616 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 GULP1Q9UBP9 304 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 APOBEC3BQ9UH17 382 aaKnown RBP15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 CDYLQ9Y232 598 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 HEBP2Q9Y5Z4 205 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 CSNK1G3Q9Y6M4 447 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 PCDH15Q96QU1 1955 aa15.7■□□□□ 0.1
PRPF40A-212ENST00000545856 RALGAPA1Q6GYQ0 2036 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 TDRD6O60522 2096 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 IFRD1O00458 451 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 KDM1AO60341 852 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 SYPP08247 313 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 SLC35G4P0C7Q5 338 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CTSEP14091 401 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CD1DP15813 335 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 NDUFS1P28331 727 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 HALP42357 657 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 AP1S2P56377 157 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 NAA20P61599 178 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CTBSQ01459 385 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 SRSF5Q13243 272 aaKnown RBP15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 TPRG1LQ5T0D9 272 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 ABRAXAS1Q6UWZ7 409 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 PRR23BQ6ZRT6 265 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CHST15Q7LFX5 561 aaPredicted RBP15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 HID1Q8IV36 788 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CPNE9Q8IYJ1 553 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CFAP206Q8IYR0 622 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 C4orf33Q8N1A6 199 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 CCDC126Q96EE4 140 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 RDH14Q9HBH5 336 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms