RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PIH1D1Q9NWS0 290 aaKnown RBP20.63■□□□□ 0.89
SCARB1-210ENST00000545493 IGLV3-16A0A075B6K0 115 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 TRBV5-4A0A0C4DH59 114 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 KIAA0754O94854 1291 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 TIAF1O95411 115 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 SLC35G4P0C7Q5 338 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 PRKAR1AP10644 381 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 F8A1P23610 371 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 HADHAP40939 763 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 CDKN1CP49918 316 aaPredicted RBP20.62■□□□□ 0.89
SCARB1-210ENST00000545493 POLE2P56282 527 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 IL11RAQ14626 422 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 PARP6Q2NL67 630 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 ZNF658BQ4V348 819 aaPredicted RBP20.62■□□□□ 0.89
SCARB1-210ENST00000545493 ATP1A1-AS1Q5TC04 95 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 CERS6Q6ZMG9 384 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 PRICKLE2Q7Z3G6 844 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 SPC24Q8NBT2 197 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 GALNT6Q8NCL4 622 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 UBXN4Q92575 508 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 DCUN1D1Q96GG9 259 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 COPS8Q99627 209 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 MAP3K3Q99759 626 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 TMEM121Q9BTD3 319 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 EFHD1Q9BUP0 239 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 LRRC40Q9H9A6 602 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 GEMIN8Q9NWZ8 242 aaKnown RBP20.62■□□□□ 0.89
SCARB1-210ENST00000545493 SLC24A2Q9UI40 661 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 ACSL5Q9ULC5 683 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 RPS6KL1Q9Y6S9 549 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 SPTA1P02549 2419 aa20.62■□□□□ 0.89
SCARB1-210ENST00000545493 KLHL33A6NCF5 533 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 H7C0S8 307 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 TERTO14746 1132 aaKnown RBP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 SPAG6O75602 509 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 PTMAP06454 111 aaKnown RBP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 ACRV1P26436 265 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 KCNAB1Q14722 419 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 DNTTIP2Q5QJE6 756 aaKnown RBP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 CAPRIN2Q6IMN6 1127 aaKnown RBP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 KLHL35Q6PF15 583 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 C6orf15Q6UXA7 325 aaPredicted RBP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 RASGRP3Q8IV61 690 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 ATG4AQ8WYN0 398 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 KIR3DX1Q9H7L2 352 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 COG4Q9H9E3 785 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 NLE1Q9NVX2 485 aaPredicted RBP20.61■□□□□ 0.89
SCARB1-210ENST00000545493 IMPACTQ9P2X3 320 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 CROTQ9UKG9 612 aa20.61■□□□□ 0.89
SCARB1-210ENST00000545493 TLCD2A6NGC4 264 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 AP2A1O95782 977 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 EBLN1P0CF75 366 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 RALBP11234 206 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 ATP1B2P14415 290 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-210ENST00000545493 FOLR1P15328 257 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 TPH1P17752 444 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 TUBB3Q13509 450 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 SEPT6Q14141 434 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 POU6F1Q14863 301 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 P3H1Q32P28 736 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 SERPINA9Q86WD7 417 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 OOSP2Q86WS3 158 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 PPP1R3BQ86XI6 285 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 TXLNBQ8N3L3 684 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 TAB3Q8N5C8 712 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-210ENST00000545493 LRRC45Q96CN5 670 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 STAMBPL1Q96FJ0 436 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 CATSPER2Q96P56 530 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 CD180Q99467 661 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 ZDHHC3Q9NYG2 299 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 LNPEPQ9UIQ6 1025 aa20.6■□□□□ 0.89
SCARB1-210ENST00000545493 CFAP99D6REC4 459 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 POLBP06746 335 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 DLSTP36957 453 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 ARCN1P48444 511 aaKnown RBP20.59■□□□□ 0.89
SCARB1-210ENST00000545493 KCNAB2Q13303 367 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 OASLQ15646 514 aaKnown RBP20.59■□□□□ 0.89
SCARB1-210ENST00000545493 GPR33Q49SQ1 333 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 PIANPQ8IYJ0 282 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 CFAP206Q8IYR0 622 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 SIDT2Q8NBJ9 832 aaKnown RBP20.59■□□□□ 0.89
SCARB1-210ENST00000545493 PPM1MQ96MI6 270 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 FAM117AQ9C073 453 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 SLC25A18Q9H1K4 315 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 OR52A5Q9H2C5 316 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 ADNPQ9H2P0 1102 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 HRASLS2Q9NWW9 162 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 HEMK1Q9Y5R4 338 aaPredicted RBP20.59■□□□□ 0.89
SCARB1-210ENST00000545493 RELNP78509 3460 aa20.59■□□□□ 0.89
SCARB1-210ENST00000545493 SFTPCP11686 197 aa20.58■□□□□ 0.89
SCARB1-210ENST00000545493 KPNA2P52292 529 aaKnown RBP20.58■□□□□ 0.89
SCARB1-210ENST00000545493 DBN1Q16643 649 aa20.58■□□□□ 0.89
SCARB1-210ENST00000545493 ZRANB3Q5FWF4 1079 aa20.58■□□□□ 0.89
SCARB1-210ENST00000545493 HEXDCQ8WVB3 486 aa20.58■□□□□ 0.89
SCARB1-210ENST00000545493 ZFPM2Q8WW38 1151 aa20.58■□□□□ 0.89
SCARB1-210ENST00000545493 TRIM4Q9C037 500 aa20.58■□□□□ 0.89
SCARB1-210ENST00000545493 PIKFYVEQ9Y2I7 2098 aa20.57■□□□□ 0.88
SCARB1-210ENST00000545493 C17orf113A0A1B0GUU1 675 aa20.57■□□□□ 0.88
SCARB1-210ENST00000545493 CCDC78A2IDD5 438 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms