RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 GSTM4Q03013 218 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 SRSF6Q13247 344 aaKnown RBP16.54■□□□□ 0.24
HOXD8-204ENST00000544999 ITIH4Q14624 930 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 DBN1Q16643 649 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 TSTD2Q5T7W7 516 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 CAPRIN2Q6IMN6 1127 aaKnown RBP16.54■□□□□ 0.24
HOXD8-204ENST00000544999 KLHL35Q6PF15 583 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 MICALCLQ6ZW33 695 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 PIANPQ8IYJ0 282 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 LILRA3Q8N6C8 439 aaPredicted RBP16.54■□□□□ 0.24
HOXD8-204ENST00000544999 OR13J1Q8NGT2 312 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.54■□□□□ 0.24
HOXD8-204ENST00000544999 RMDN2Q96LZ7 410 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 COG4Q9H9E3 785 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 EIF2B3Q9NR50 452 aaKnown RBP16.54■□□□□ 0.24
HOXD8-204ENST00000544999 HOMER3Q9NSC5 361 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 SIDT1Q9NXL6 827 aaKnown RBP16.54■□□□□ 0.24
HOXD8-204ENST00000544999 FAM8A1Q9UBU6 413 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 HEBP2Q9Y5Z4 205 aa16.54■□□□□ 0.24
HOXD8-204ENST00000544999 QSOX1O00391 747 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 POLBP06746 335 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 APRTP07741 180 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 NDUFS1P28331 727 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 CXCR5P32302 372 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 NSG1P42857 185 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 PLCL1Q15111 1095 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 ZNF658BQ4V348 819 aaPredicted RBP16.53■□□□□ 0.24
HOXD8-204ENST00000544999 CACHD1Q5VU97 1274 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 IRGCQ6NXR0 463 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 DUS1LQ6P1R4 473 aaKnown RBP16.53■□□□□ 0.24
HOXD8-204ENST00000544999 AFTPHQ6ULP2 937 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 PACS1Q6VY07 963 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 NLRP9Q7RTR0 991 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 GSTA5Q7RTV2 222 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 PEX13Q92968 403 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 NKD1Q969G9 470 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 WBP1Q96G27 269 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 CTRCQ99895 268 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 KIR3DX1Q9H7L2 352 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 APMAPQ9HDC9 416 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 SEMA5BQ9P283 1151 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 TCAF1Q9Y4C2 921 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 COLEC10Q9Y6Z7 277 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 PIKFYVEQ9Y2I7 2098 aa16.53■□□□□ 0.24
HOXD8-204ENST00000544999 CCDC162PA2VCL2 907 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 OR51F1A6NGY5 319 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 POLR1CO15160 346 aaPredicted RBP16.52■□□□□ 0.24
HOXD8-204ENST00000544999 RAD1O60671 282 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 RASSF9O75901 435 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 KCNJ1P48048 391 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 SEPHS1P49903 392 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 BASP1P80723 227 aaKnown RBP16.52■□□□□ 0.24
HOXD8-204ENST00000544999 ACVR1Q04771 509 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 RPA4Q13156 261 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 GSE1Q14687 1217 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 LYPLAL1Q5VWZ2 237 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 ZNF449Q6P9G9 518 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 FAM92BQ6ZTR7 304 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 VASH2Q86V25 355 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 PPHLN1Q8NEY8 458 aaKnown RBP16.52■□□□□ 0.24
HOXD8-204ENST00000544999 JPH3Q8WXH2 748 aaPredicted RBP16.52■□□□□ 0.24
HOXD8-204ENST00000544999 KLHL6Q8WZ60 621 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 SLC39A7Q92504 469 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 TTC9Q92623 222 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 HDAC10Q969S8 669 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 SPRY4Q9C004 299 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 SMARCAL1Q9NZC9 954 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 SLC2A6Q9UGQ3 507 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 SLC24A2Q9UI40 661 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 JRKLQ9Y4A0 524 aa16.52■□□□□ 0.24
HOXD8-204ENST00000544999 OR5K3A6NET4 321 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 AP3B1O00203 1094 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
HOXD8-204ENST00000544999 KIF1CO43896 1103 aaKnown RBP16.51■□□□□ 0.23
HOXD8-204ENST00000544999 GOT2P00505 430 aaKnown RBP16.51■□□□□ 0.23
HOXD8-204ENST00000544999 CD151P48509 253 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 KRT33BQ14525 404 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 TAF1BQ53T94 588 aaPredicted RBP16.51■□□□□ 0.23
HOXD8-204ENST00000544999 KIAA1614Q5VZ46 1190 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 PCSK4Q6UW60 755 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 CERS6Q6ZMG9 384 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 OOSP2Q86WS3 158 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 CACNA2D3Q8IZS8 1091 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 RASGEF1CQ8N431 466 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 CLDN19Q8N6F1 224 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 IL22RA1Q8N6P7 574 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 PRELID2Q8N945 189 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 ZSCAN1Q8NBB4 408 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 UBXN4Q92575 508 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 SGSM3Q96HU1 749 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 PBKQ96KB5 322 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 CD180Q99467 661 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 TTC1Q99614 292 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 OR52A5Q9H2C5 316 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 PILRAQ9UKJ1 303 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 TMEM184BQ9Y519 407 aaPredicted RBP16.51■□□□□ 0.23
HOXD8-204ENST00000544999 PCDHGA4Q9Y5G9 962 aa16.51■□□□□ 0.23
HOXD8-204ENST00000544999 PRSS21Q9Y6M0 314 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms