RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ANKMY2Q8IV38 441 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 IGDCC3Q8IVU1 814 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 PDIK1LQ8N165 341 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 TRAM1L1Q8N609 369 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 OR13J1Q8NGT2 312 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 FBXO25Q8TCJ0 367 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 MFSD3Q96ES6 412 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 STAMBPL1Q96FJ0 436 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 CDKN2AIPNLQ96HQ2 116 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 COX14Q96I36 57 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 KIFC1Q9BW19 673 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 UGT1A7Q9HAW7 530 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 UGT1A10Q9HAW8 530 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 UGT1A8Q9HAW9 530 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 ARFGAP3Q9NP61 516 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 ZDHHC18Q9NUE0 388 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 NFKBIL1Q9UBC1 381 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-206ENST00000544964 CHMP2BQ9UQN3 213 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 COL12A1Q99715 3063 aa12.27□□□□□ -0.45
ACTN1-206ENST00000544964 RELNP78509 3460 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 CCDC162PA2VCL2 907 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 OR51F1A6NGY5 319 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 SLC28A2O43868 658 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 SRP72O76094 671 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 PRAMEF1O95521 474 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 FAM87AP0C7U9 286 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 PRSS56P0CW18 603 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 PSMA3P25788 255 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ELK3P41970 407 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 FASLGP48023 281 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 CARSP49589 748 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 CYP4F2P78329 520 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 CAV1Q03135 178 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 NFATC3Q12968 1075 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 FASTKD3Q14CZ7 662 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ATP13A5Q4VNC0 1218 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ZNF648Q5T619 568 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ZDHHC20Q5W0Z9 365 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 MARK2Q7KZI7 788 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 NLRP9Q7RTR0 991 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 CCDC25Q86WR0 208 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ZNF761Q86XN6 746 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 OR4D9Q8NGE8 314 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ZNF398Q8TD17 642 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 HDAC10Q969S8 669 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ZNF669Q96BR6 464 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 WDR83Q9BRX9 315 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ZSCAN5AQ9BUG6 496 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 ASB8Q9H765 288 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 MRM3Q9HC36 420 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 TREX1Q9NSU2 369 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 STARD5Q9NSY2 213 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 TMPRSS11EQ9UL52 423 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 RIMKLBQ9ULI2 386 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 CNOT6Q9ULM6 557 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 PCDHGA3Q9Y5H0 932 aa12.26□□□□□ -0.45
ACTN1-206ENST00000544964 OAS3Q9Y6K5 1087 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 V9GYY5 206 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 SPENQ96T58 3664 aaKnown RBP12.26□□□□□ -0.45
ACTN1-206ENST00000544964 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 FAM237BA0A1B0GVD1 139 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 STMND1H3BQB6 276 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 DNAJC6O75061 913 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 GOT2P00505 430 aaKnown RBP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 PYGLP06737 847 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 PGAM1P18669 254 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 MPSTP25325 297 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 CDKN1CP49918 316 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 ACVR1Q04771 509 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 TRA2AQ13595 282 aaKnown RBP eCLIP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 LRP8Q14114 963 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 ANKRD20A4Q4UJ75 823 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 ZRANB3Q5FWF4 1079 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 CENPUQ71F23 418 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 GALNT13Q8IUC8 556 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 IFT20Q8IY31 132 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 SFRP1Q8N474 314 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 FBXO36Q8NEA4 188 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 OR6P1Q8NGX9 317 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 JPH3Q8WXH2 748 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 CFAP36Q96G28 342 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 EBNA1BP2Q99848 306 aaKnown RBP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 SAYSD1Q9NPB0 183 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 AKAP7Q9P0M2 348 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-206ENST00000544964 B3GALT1Q9Y5Z6 326 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 TEX264Q9Y6I9 313 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 SLC30A1Q9Y6M5 507 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 RPS6KL1Q9Y6S9 549 aa12.25□□□□□ -0.45
ACTN1-206ENST00000544964 A6NCN8 305 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 E7ESA3 106 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 H7C0S8 307 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 MTX2O75431 263 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 VAPBO95292 243 aa12.24□□□□□ -0.45
ACTN1-206ENST00000544964 ASMTLO95671 621 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms