RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PCDHA2Q9Y5H9 948 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 CD247P20963 164 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 TAF1AQ15573 450 aaPredicted RBP12.95□□□□□ -0.34
TNC-212ENST00000542877 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 SERPINA9Q86WD7 417 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 DCAKDQ8WVC6 231 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 FAM83DQ9H4H8 585 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 TBC1D14Q9P2M4 693 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 ZNF879B4DU55 563 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 NEDD8-MDP1E9PL57 170 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 REM1O75628 298 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 SLC1A2P43004 574 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 ZNF460Q14592 562 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 ATP13A5Q4VNC0 1218 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 PLEKHG4Q58EX7 1191 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 BTN2A1Q7KYR7 527 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 MPP5Q8N3R9 675 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 OR10G6Q8NH81 332 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 ZNF563Q8TA94 476 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 RIPK3Q9Y572 518 aa12.95□□□□□ -0.34
TNC-212ENST00000542877 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 hCG_2039718K7EN88 272 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 TBX10O75333 385 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 RBM48Q5RL73 367 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 MAB21L3Q8N8X9 362 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 GRPEL2Q8TAA5 225 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 IKZF2Q9UKS7 526 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 RUVBL1Q9Y265 456 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 TESMINQ9Y4I5 508 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 A0A0X1KG70 313 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 AGRPO00253 132 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 PLSCR1O15162 318 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ASPAP45381 313 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 MAPK12P53778 367 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ERVK-8P63133 956 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 KLHL35Q6PF15 583 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 RASSF6Q6ZTQ3 369 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 USP30Q70CQ3 517 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ERI1Q8IV48 349 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 ZNF433Q8N7K0 673 aaPredicted RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 PCED1BQ96HM7 432 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 CCDC177Q9NQR7 707 aaPredicted RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 TELO2Q9Y4R8 837 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 CCL22O00626 93 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ORC5O43913 435 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 IMPDH1P20839 514 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ARHGDIBP52566 201 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 FAM174BQ3ZCQ3 159 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 FBXO48Q5FWF7 155 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 PHYKPLQ8IUZ5 450 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 SIDT2Q8NBJ9 832 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 SNX33Q8WV41 574 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 EXOSC8Q96B26 276 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 GPATCH1Q9BRR8 931 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 KLF11O14901 512 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 CDH1P12830 882 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 LILRA4P59901 499 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 SF1Q15637 639 aaKnown RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 PGBD2Q6P3X8 592 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 LBX2Q6XYB7 198 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 CPNE9Q8IYJ1 553 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 TAMM41Q96BW9 452 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ZNF570Q96NI8 536 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 FCRL5Q96RD9 977 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 CNPPD1Q9BV87 410 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 MAP10Q9P2G4 905 aa12.94□□□□□ -0.34
TNC-212ENST00000542877 ZNF282Q9UDV7 671 aaPredicted RBP12.94□□□□□ -0.34
TNC-212ENST00000542877 FAM172BPA6NC97 362 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 SLC22A1O15245 554 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 NME6O75414 186 aaPredicted RBP12.93□□□□□ -0.34
TNC-212ENST00000542877 DAG1Q14118 895 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 SLC24A5Q71RS6 500 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 CLEC4AQ9UMR7 237 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 PCDHGA11Q9Y5H2 935 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 AZGP1P25311 298 aaKnown RBP12.93□□□□□ -0.34
TNC-212ENST00000542877 ITPKBP27987 946 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 AKR1D1P51857 326 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 RAB2AP61019 212 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 HERVK_113P63132 956 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 KLHL22Q53GT1 634 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 PITRM1Q5JRX3 1037 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 TAF8Q7Z7C8 310 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 ANKRD46Q86W74 232 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 ERVK-6Q9BXR3 956 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 PPIEQ9UNP9 301 aaKnown RBP12.93□□□□□ -0.34
TNC-212ENST00000542877 RBMX2Q9Y388 322 aaKnown RBP12.93□□□□□ -0.34
TNC-212ENST00000542877 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
TNC-212ENST00000542877 PCDHGC4Q9Y5F7 938 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms