RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TTC33Q6PID6 262 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 ZNF773Q6PK81 442 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 C16orf89Q6UX73 402 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 RSPO2Q6UXX9 243 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TRIM72Q6ZMU5 477 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 RNF111Q6ZNA4 994 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SLC16A12Q6ZSM3 486 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 BBS12Q6ZW61 710 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 USP53Q70EK8 1073 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TMPRSS7Q7RTY8 843 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 STRA8Q7Z7C7 330 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 LINC00523Q86TU6 105 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FJX1Q86VR8 437 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 AMIGO1Q86WK6 493 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 DGKHQ86XP1 1220 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 THNSL2Q86YJ6 484 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SPACA3Q8IXA5 215 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SHISA5Q8N114 240 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 NAGSQ8N159 534 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PDIK1LQ8N165 341 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 CRYBG2Q8N1P7 616 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PPM1KQ8N3J5 372 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 STX19Q8N4C7 294 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM151AQ8N4L1 468 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 CPA6Q8N4T0 437 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 POU5F2Q8N7G0 328 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 NIPA2Q8N8Q9 360 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 LRRC57Q8N9N7 239 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 IL17RCQ8NAC3 791 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM35BQ8NCS4 154 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 IL17RDQ8NFM7 739 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 OR52H1Q8NGJ2 320 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 OR6Q1Q8NGQ2 317 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 NDNFQ8TB73 568 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SLC7A14Q8TBB6 771 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FBXO25Q8TCJ0 367 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 NETO1Q8TDF5 533 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 HDAC2Q92769 488 aaKnown RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PROX1Q92786 737 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 ATOH1Q92858 354 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FBXW5Q969U6 566 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 KIAA1191Q96A73 305 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 E2F7Q96AV8 911 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PTERQ96BW5 349 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TMCO6Q96DC7 493 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FAM89AQ96GI7 184 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM41AQ96HV5 264 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 ELMO2Q96JJ3 720 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 RNF170Q96K19 258 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FAM227BQ96M60 508 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 HSPA12BQ96MM6 686 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 RNF145Q96MT1 663 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 KLHL32Q96NJ5 620 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 DACH2Q96NX9 599 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FCRL3Q96P31 734 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PPP1R2P1Q96PQ5 205 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FAM111AQ96PZ2 611 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 OR5M11Q96RB7 305 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 UHRF1Q96T88 793 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PSMB7Q99436 277 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PI4K2AQ9BTU6 479 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC32Q9BV29 185 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 KATNAL1Q9BW62 490 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 TSSK1BQ9BXA7 367 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PINK1Q9BXM7 581 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SLC12A9Q9BXP2 914 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 BCL2L14Q9BZR8 327 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.29□□□□□ -1.721e-6■■□□□ 14.4
SNHG1-219ENST00000542112 SHARPINQ9H0F6 387 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC8Q9H0W5 538 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SPNS1Q9H2V7 528 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 MMP27Q9H306 513 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 OPA3Q9H6K4 179 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 MINDY3Q9H8M7 445 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 LIN28AQ9H9Z2 209 aaKnown RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SLC52A2Q9HAB3 445 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 MCCC2Q9HCC0 563 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 LRRC4CQ9HCJ2 640 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 SMYD2Q9NRG4 433 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 DUSP22Q9NRW4 184 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 ABCC13Q9NSE7 274 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 IMP3Q9NV31 184 aaKnown RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 GRHL1Q9NZI5 618 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 ZSWIM5Q9P217 1185 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 UXTQ9UBK9 157 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 NDOR1Q9UHB4 597 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 AFF4Q9UHB7 1163 aaKnown RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 CHORDC1Q9UHD1 332 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 BTNL2Q9UIR0 455 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 DBR1Q9UK59 544 aaKnown RBP4.29□□□□□ -1.72
SNHG1-219ENST00000542112 FBXO5Q9UKT4 447 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 MINPP1Q9UNW1 487 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 PLCL2Q9UPR0 1127 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 CTNND2Q9UQB3 1225 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 BAIAP2Q9UQB8 552 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 POMPQ9Y244 141 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 KLHL20Q9Y2M5 609 aa4.29□□□□□ -1.72
SNHG1-219ENST00000542112 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms