RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 UNC119BA6NIH7 251 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 MARCH11A6NNE9 402 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 GOLGA8SH3BPF8 625 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PSMD9O00233 223 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SYT5O00445 386 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 AP5Z1O43299 807 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PIP5K1CO60331 668 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 RNASEH1O60930 286 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 LUC7L3O95232 432 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SRPRAP08240 638 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 DLDP09622 509 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ACADMP11310 421 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 KRT3P12035 628 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 UNGP13051 313 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ATP1A3P13637 1013 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 MMP8P22894 467 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 HOXD9P28356 352 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 OXTRP30559 389 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SDC4P31431 198 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PGDP52209 483 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 UBASH3AP57075 661 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SULT2A1Q06520 285 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 GPS1Q13098 491 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SRSF5Q13243 272 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF177Q13360 481 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 EIF4EBP2Q13542 120 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 TAF5Q15542 800 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ASIC2Q16515 512 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 LPAL2Q16609 132 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PTCHD3Q3KNS1 767 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SPATS1Q496A3 300 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PLK5Q496M5 336 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 FAM133BQ5BKY9 247 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SPDYAQ5MJ70 313 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 DEPDC1Q5TB30 811 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SFMBT2Q5VUG0 894 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 RAP1GAP2Q684P5 730 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 RFWD3Q6PCD5 774 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SERPINA13PQ6UXR4 307 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 KIAA0408Q6ZU52 694 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 KBTBD6Q86V97 674 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 VPS36Q86VN1 386 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PHF13Q86YI8 300 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 RASGRP3Q8IV61 690 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 KIAA2013Q8IYS2 634 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 DCLK2Q8N568 766 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.46□□□□□ -1.544e-6■■■■■ 36.6
CPSF7-220ENST00000541963 KDM1BQ8NB78 822 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 TOR1AIP2Q8NFQ8 470 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 SLC30A5Q8TAD4 765 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 FAM71BQ8TC56 605 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM171Q8WVE6 324 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PRCCQ92733 491 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PGAP3Q96FM1 320 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 C1orf74Q96LT6 269 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 RPRD1AQ96P16 312 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 NPY6RQ99463 290 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 FUCA2Q9BTY2 467 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 TKTL2Q9H0I9 626 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 HSD3B7Q9H2F3 369 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 PRDM16Q9HAZ2 1276 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 GLOD4Q9HC38 313 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 VPS45Q9NRW7 570 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ABCB8Q9NUT2 735 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ADAM22Q9P0K1 906 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 GGA2Q9UJY4 613 aa5.46□□□□□ -1.54
CPSF7-220ENST00000541963 NOCTQ9UK39 431 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 REXO2Q9Y3B8 237 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 BZW2Q9Y6E2 419 aaKnown RBP5.46□□□□□ -1.54
CPSF7-220ENST00000541963 A0A1B0GVM2 712 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 A0A1W2PQF6 199 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 TARSL2A2RTX5 802 aaKnown RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM200CA6NKL6 621 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SIGLEC16A6NMB1 481 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 WASH3PC4AMC7 463 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 EPHB6O15197 1021 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 CLDN11O75508 207 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZFPL1O95159 310 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 EPN2O95208 641 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 VIPP01282 170 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 TPM1P09493 284 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF806P0C7X5 589 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 PDGFRAP16234 1089 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF20P17024 532 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 CHRNB2P17787 502 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 GABRG2P18507 467 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 GPD1P21695 349 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 HLA-FP30511 346 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SLC5A2P31639 672 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 UQCRC1P31930 480 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 RDXP35241 583 aaKnown RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SERPINF1P36955 418 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 P2RY2P41231 377 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 DHPSP49366 369 aaPredicted RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 CXCR3P49682 368 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ALDH18A1P54886 795 aaKnown RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 CDH4P55283 916 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms