RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 DGKEP52429 567 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CTSCP53634 463 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NAGLUP54802 743 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GSTM4Q03013 218 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CSTF1Q05048 431 aaKnown RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 MTAPQ13126 283 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GTF2H3Q13889 308 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 FGL2Q14314 439 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 TSSK4Q6SA08 328 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SBSNQ6UWP8 590 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 C6orf89Q6UWU4 347 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CYHR1Q6ZMK1 362 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ATG14Q6ZNE5 492 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 Q6ZS52 159 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NEK10Q6ZWH5 1172 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SYT13Q7L8C5 426 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ADGRG6Q86SQ4 1221 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 HORMAD1Q86X24 394 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 PLA2G15Q8NCC3 412 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ZBTB44Q8NCP5 570 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 PIWIL2Q8TC59 973 aaKnown RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 C10orf82Q8WW14 230 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ZNF514Q96K75 400 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CNDP1Q96KN2 507 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 TMEM237Q96Q45 408 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NELL2Q99435 816 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SIKE1Q9BRV8 207 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 C1QTNF7Q9BXJ2 289 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CHRDQ9H2X0 955 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 LMAN1LQ9HAT1 526 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NPHS2Q9NP85 383 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NUDT4Q9NZJ9 180 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NUMA1Q14980 2115 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SUPT3HB4E1H0 165 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 STX16-NPEPL1H3BU86 382 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 STX16O14662 325 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 LILRB5O75023 590 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SUPT3HO75486 399 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GPC4O75487 556 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 HSPA4LO95757 839 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 NAA20P61599 178 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 HERVK_113P63132 956 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CDK3Q00526 305 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GALNT1Q10472 559 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SGCGQ13326 291 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 IRF4Q15306 451 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CFAP157Q5JU67 520 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ZNF678Q5SXM1 525 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 TMEM220Q6QAJ8 160 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 RAB44Q7Z6P3 723 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 HEATR4Q86WZ0 1026 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GPSM1Q86YR5 675 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 FBXO39Q8N4B4 442 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 PTGR2Q8N8N7 351 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GBP7Q8N8V2 638 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ASZ1Q8WWH4 475 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ELMO1Q92556 727 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 EXT2Q93063 718 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 PHF21BQ96EK2 531 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 LINC00615Q96LM1 132 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 LENG8Q96PV6 779 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CCM2Q9BSQ5 444 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ERVK-6Q9BXR3 956 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 TEX101Q9BY14 249 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 FAM126AQ9BYI3 521 aaPredicted RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 SLC17A9Q9BYT1 436 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 CYP4F12Q9HCS2 524 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 ATXN10Q9UBB4 475 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 HAO1Q9UJM8 370 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 GPR34Q9UPC5 381 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 PCDHGA2Q9Y5H1 932 aa13.99□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3DA0A087WVF3 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3IA0A087WXS9 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3EA0A087X179 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3KA0A087X1G2 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3FA6NER0 549 aaPredicted RBP13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3LB9A6J9 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 PAK4O96013 591 aaPredicted RBP13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 IGLV3-19P01714 112 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3HP0C7X1 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 GFAPP14136 432 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TRIM23P36406 574 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TPMTP51580 245 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 HK2P52789 917 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 SF3A3Q12874 501 aaKnown RBP eCLIP13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 BOP1Q14137 746 aaKnown RBP13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TGFBIQ15582 683 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 PPP1R3AQ16821 1122 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 PFKFB4Q16877 469 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 ARL13AQ5H913 290 aaPredicted RBP13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3GQ6DHY5 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3CQ6IPX1 549 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 FOXR1Q6PIV2 292 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 FRA10AC1Q70Z53 315 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TRIM74Q86UV6 250 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TRIM69Q86WT6 500 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 WDR75Q8IWA0 830 aaKnown RBP13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 KIAA2013Q8IYS2 634 aa13.98□□□□□ -0.17
CYB561A3-216ENST00000540755 TBC1D3Q8IZP1 549 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms