RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 INPPL1O15357 1258 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 TBC1D4O60343 1298 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 MC4RP32245 332 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 RGRP47804 291 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 HTR6P50406 440 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 GABARAPL2P60520 117 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 GNA12Q03113 381 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 NR1D2Q14995 579 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 PCBP2Q15366 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
NPC1-202ENST00000540608 GALNT18Q6P9A2 607 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 CHDHQ8NE62 594 aaPredicted RBP12.11□□□□□ -0.47
NPC1-202ENST00000540608 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 OR2T12Q8NG77 320 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 NUDT8Q8WV74 236 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 KCNJ9Q92806 393 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
NPC1-202ENST00000540608 ARHGAP39Q9C0H5 1083 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 SMURF2Q9HAU4 748 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 MAGEE1Q9HCI5 957 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 USE1Q9NZ43 259 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 PDE10AQ9Y233 779 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 ERGIC3Q9Y282 383 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 TNPO3Q9Y5L0 923 aaKnown RBP12.11□□□□□ -0.47
NPC1-202ENST00000540608 COMMD10Q9Y6G5 202 aa12.11□□□□□ -0.47
NPC1-202ENST00000540608 MANSC4A6NHS7 340 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 J3QRK9 145 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 OR7A17O14581 309 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 ADAMTS4O75173 837 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 ATP6V1G1O75348 118 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 KATNA1O75449 491 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 FUCA1P04066 466 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 IL7RP16871 459 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 MAGEA8P43361 318 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 KCNC4Q03721 635 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 TAF10Q12962 218 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 BFSP2Q13515 415 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 NR6A1Q15406 480 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 KCNA10Q16322 511 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 AAK1Q2M2I8 961 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 C5orf22Q49AR2 442 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 RFTN2Q52LD8 501 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 LGI2Q8N0V4 545 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 FAM86B1Q8N7N1 296 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 OR7D4Q8NG98 312 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 FIG4Q92562 907 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 SGCDQ92629 289 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 FKBP10Q96AY3 582 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 FBXL8Q96CD0 374 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 RAD21L1Q9H4I0 556 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 SPC25Q9HBM1 224 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 VAPAQ9P0L0 249 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 UBA2Q9UBT2 640 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 ADGRE2Q9UHX3 823 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 FKBPLQ9UIM3 349 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 GABRQQ9UN88 632 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 ANKRD12Q6UB98 2062 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 C1orf232A0A0U1RR37 186 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 F5H5T6 163 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 K7EPI3 171 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 GSTA4O15217 222 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 DFNA5O60443 496 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 CST1P01037 141 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 CR2P20023 1033 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 ARL1P40616 181 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 BCAP31P51572 246 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 MTA1Q13330 715 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 TOP3AQ13472 1001 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 ENPP6Q6UWR7 440 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 GOLGA7Q7Z5G4 137 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 RTN4RL1Q86UN2 441 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 CHCHD4Q8N4Q1 142 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 ATAD1Q8NBU5 361 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 OR4F6Q8NGB9 312 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 OR52E4Q8NGH9 312 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 PDLIM5Q96HC4 596 aaKnown RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 SMIM14Q96QK8 99 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 AMBRA1Q9C0C7 1298 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 BLOC1S6Q9UL45 172 aa12.1□□□□□ -0.47
NPC1-202ENST00000540608 PRG3Q9Y2Y8 225 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 POLR3HQ9Y535 204 aaPredicted RBP12.1□□□□□ -0.47
NPC1-202ENST00000540608 E5RI56 91 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ESR1P03372 595 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 HTR1AP08908 422 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 IST1P53990 364 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 MLLT10P55197 1068 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 TPD52P55327 224 aaPredicted RBP12.09□□□□□ -0.47
NPC1-202ENST00000540608 CRHR2Q13324 411 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ABRAXAS2Q15018 415 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 NKG7Q16617 165 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 MEP1AQ16819 746 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 RGS21Q2M5E4 152 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 ZRANB3Q5FWF4 1079 aa12.09□□□□□ -0.47
NPC1-202ENST00000540608 NIPAL1Q6NVV3 410 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms