RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	KIR3DX1	Q9H7L2	352 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NLE1	Q9NVX2	485 aa	Predicted RBP	12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ZDHHC3	Q9NYG2	299 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SLC24A2	Q9UI40	661 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PCDHGA6	Q9Y5G7	932 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RPS6KL1	Q9Y6S9	549 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SPTA1	P02549	2419 aa		12.8	□□□□□ -0.36
SEMA4D-223	ENST00000540475		A0A0U1RQJ8	604 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MACROD2	A1Z1Q3	448 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GOLGA6L9	A6NEM1	432 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TLCD2	A6NGC4	264 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MROH6	A6NGR9	719 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PSMD3	O43242	534 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RASSF9	O75901	435 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	AP2A1	O95782	977 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MT-ND3	P03897	115 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GSTM1	P09488	218 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RALB	P11234	206 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CCR10	P46092	362 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CD151	P48509	253 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	POLE2	P56282	527 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GSTM4	Q03013	218 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CDC20	Q12834	499 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NFATC3	Q12968	1075 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SPARCL1	Q14515	664 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	IRGC	Q6NXR0	463 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	DET1	Q7L5Y6	550 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KIAA1328	Q86T90	577 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PPP1R3B	Q86XI6	285 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CFAP206	Q8IYR0	622 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	UNC5B	Q8IZJ1	945 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HM13	Q8TCT9	377 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	STYX	Q8WUJ0	223 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CDKN2AIPNL	Q96HQ2	116 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RMDN2	Q96LZ7	410 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	COPS8	Q99627	209 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ULBP3	Q9BZM4	244 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	LRRC40	Q9H9A6	602 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HRASLS2	Q9NWW9	162 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CRLS1	Q9UJA2	301 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	COLEC10	Q9Y6Z7	277 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RELN	P78509	3460 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SPTB	P11277	2137 aa		12.79	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FLNB	O75369	2602 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TCRBV7S2A1N4T	A0A589	114 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SLC28A2	O43868	658 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MSL3P1	P0C860	447 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FOLR1	P15328	257 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ITGAL	P20701	1170 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ACRV1	P26436	265 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	NDUFS1	P28331	727 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	OAS2	P29728	719 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	STIP1	P31948	543 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MC4R	P32245	332 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GDF10	P55107	478 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HSD11B2	P80365	405 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ACY1	Q03154	408 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	RPA4	Q13156	261 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	KCNAB2	Q13303	367 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	OASL	Q15646	514 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	P3H1	Q32P28	736 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ARHGEF18	Q6ZSZ5	1173 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	LILRA3	Q8N6C8	439 aa	Predicted RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FAM71D	Q8N9W8	422 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	GALNT6	Q8NCL4	622 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	STARD8	Q92502	1023 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	DCUN1D1	Q96GG9	259 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	DNAJC1	Q96KC8	554 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	C12orf66	Q96MD2	445 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	MAP3K3	Q99759	626 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FAM117A	Q9C073	453 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	TWSG1	Q9GZX9	223 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	OR52A5	Q9H2C5	316 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	FAM96A	Q9H5X1	160 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PDE7B	Q9NP56	450 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	IMP3	Q9NV31	184 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PADI1	Q9ULC6	663 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	BTRC	Q9Y297	605 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	HEBP2	Q9Y5Z4	205 aa		12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	CFAP20	Q9Y6A4	193 aa	Known RBP	12.78	□□□□□ -0.36
SEMA4D-223	ENST00000540475	SEC16A	O15027	2179 aa		12.77	□□□□□ -0.36
SEMA4D-223	ENST00000540475	ERI2	A8K979	691 aa	Known RBP	12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	CFAP99	D6REC4	459 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	KIAA0754	O94854	1291 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	SUN1	O94901	812 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	AP2A2	O94973	939 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	TIAF1	O95411	115 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	ZBTB11	O95625	1053 aa	Predicted RBP	12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	FTCD	O95954	541 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	SLC35G4	P0C7Q5	338 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	TCN2	P20062	427 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	PBLD	P30039	288 aa	Predicted RBP	12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	DLST	P36957	453 aa		12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	CDKN1C	P49918	316 aa	Predicted RBP	12.77	□□□□□ -0.37
SEMA4D-223	ENST00000540475	TMPRSS15	P98073	1019 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms