RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SLC22A15Q8IZD6 547 aa10.94□□□□□ -0.66
PBX1-212ENST00000540236 LIX1Q8N485 282 aa10.94□□□□□ -0.66
PBX1-212ENST00000540236 SPPL2BQ8TCT7 592 aa10.94□□□□□ -0.66
PBX1-212ENST00000540236 CPNE2Q96FN4 548 aaPredicted RBP10.94□□□□□ -0.66
PBX1-212ENST00000540236 A0A1B0GVC2 190 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 A6NIN4 97 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 FAM159BA6NKW6 160 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 OGTO15294 1046 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 ENTPD3O75355 529 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 TGFBR2P37173 567 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 RPL38P63173 70 aaKnown RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 C17orf107Q6ZR85 190 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 PHF13Q86YI8 300 aaPredicted RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 C12orf29Q8N999 325 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 TRPV3Q8NET8 790 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 SLCO4A1Q96BD0 722 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 PRKAG2Q9UGJ0 569 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 LEF1Q9UJU2 399 aaPredicted RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 ATRNO75882 1429 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 FAM25EA8MYX2 175 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 CNTN5O94779 1100 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 NTRK1P04629 796 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 COL6A1P12109 1028 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 BRCC3P46736 316 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 GRB7Q14451 532 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 SMCO1Q147U7 214 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 SLC51BQ86UW2 128 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 RIOX2Q8IUF8 465 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 IZUMO1Q8IYV9 350 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 CA5BP1Q8WTZ4 195 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 GINS4Q9BRT9 223 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 STRA6Q9BX79 667 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 B3GNT5Q9BYG0 378 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 DPY30Q9C005 99 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 MGAT4BQ9UQ53 548 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 MYH11P35749 1972 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 IQCMA0A1B0GVH7 501 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 ORC5O43913 435 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 DLX3O60479 287 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 SIX3O95343 332 aaPredicted RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 ZNF3P17036 446 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 RAB3BP20337 219 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 RAD51Q06609 339 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 PAN3Q58A45 887 aaKnown RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 NXNL2Q5VZ03 156 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 OVOS1Q6IE37 1185 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 ZNF621Q6ZSS3 439 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 ADGRD2Q7Z7M1 963 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 GALNT10Q86SR1 603 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 TSPAN17Q96FV3 270 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 SLC39A13Q96H72 371 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 PSD2Q9BQI7 771 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 BTG4Q9NY30 223 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 TRPS1Q9UHF7 1281 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 NME4O00746 187 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 NPR3P17342 541 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 ARF5P84085 180 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 RAPSNQ13702 412 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 KCNA10Q16322 511 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 PCID2Q5JVF3 399 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 IDNKQ5T6J7 187 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 BCL2L15Q5TBC7 163 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 PM20D1Q6GTS8 502 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 CPXM1Q96SM3 734 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 GPN2Q9H9Y4 310 aaPredicted RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 APOBEC3GQ9HC16 384 aaKnown RBP10.93□□□□□ -0.66
PBX1-212ENST00000540236 CPNE7Q9UBL6 633 aa10.93□□□□□ -0.66
PBX1-212ENST00000540236 GSRP00390 522 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 TIE1P35590 1138 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 GSTM5P46439 218 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 HSPA2P54652 639 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 FGL1Q08830 312 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 BCL2A1Q16548 175 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 RELL1Q8IUW5 271 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ZNF675Q8TD23 568 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 CCDC126Q96EE4 140 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 FCRL3Q96P31 734 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 WDR83Q9BRX9 315 aaKnown RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 TBC1D17Q9HA65 648 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ZNF69Q9UC07 566 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 SLC23A1Q9UHI7 598 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 M0R233 179 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 SLC30A4O14863 429 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 APOL3O95236 402 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 PRAMEF1O95521 474 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 TSHRP16473 764 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 CYP2C18P33260 490 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 TSPAN5P62079 268 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 NFIAQ12857 509 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 HSD17B12Q53GQ0 312 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 MSANTD2Q6P1R3 559 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 PIAS4Q8N2W9 510 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms