RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ITFG1Q8TB96 612 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TMBIM1Q969X1 311 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ASB2Q96Q27 587 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 UHRF1Q96T88 793 aaPredicted RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SLC6A13Q9NSD5 602 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 WWOXQ9NZC7 414 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CLEC4EQ9ULY5 219 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SLC8A2Q9UPR5 921 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GNGT2O14610 69 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 SYN3O14994 580 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GSTA4O15217 222 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 FFAR2O15552 330 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 KDELR3O43731 214 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 GALTP07902 379 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 MBL2P11226 248 aaPredicted RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CR2P20023 1033 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 BNIP2Q12982 314 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TXNDC8Q6A555 127 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 CXorf57Q6NSI4 855 aaKnown RBP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 C10orf111Q8N326 155 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.45□□□□□ -0.26
BNIP3-202ENST00000540159 ADGRE3Q9BY15 652 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 DGCR6LQ9BY27 220 aa13.45□□□□□ -0.26
BNIP3-202ENST00000540159 A0A0C4DFX4 3053 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SZT2Q5T011 3432 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 TCRBV5S2A0A599 114 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 PTGES3LE9PB15 166 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SEC22BO75396 215 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 MLYCDO95822 493 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SHMT2P34897 504 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CSKP41240 450 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 MAGEA11P43364 429 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ADARP55265 1226 aaKnown RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 BNIP3Q12983 259 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CDH18Q13634 790 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 RAB39AQ14964 217 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SF1Q15637 639 aaKnown RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ATP6AP1Q15904 470 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SLC36A3Q495N2 470 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ARL14EPQ8N8R7 260 aaPredicted RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ZUFSPQ96AP4 578 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CASD1Q96PB1 797 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CLPBQ9H078 707 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 RIC8BQ9NVN3 520 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CD84Q9UIB8 345 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 INVSQ9Y283 1065 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SCN4AP35499 1836 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CHD5Q8TDI0 1954 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 PQBP1O60828 265 aaKnown RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 AOC2O75106 756 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 DIRAS1O95057 198 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ALBP02768 609 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 MTHFRP42898 656 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 PSMD7P51665 324 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 ZXDBP98169 803 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 NKG7Q16617 165 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 PABPC1LQ4VXU2 614 aaKnown RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 XKR7Q5GH72 579 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 LRRC8DQ7L1W4 858 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 FAM81AQ8TBF8 368 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 TSSK3Q96PN8 268 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 CCDC90BQ9GZT6 254 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 SMG9Q9H0W8 520 aaKnown RBP13.44□□□□□ -0.26
BNIP3-202ENST00000540159 PFDN4Q9NQP4 134 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 FNIP2Q9P278 1114 aa13.44□□□□□ -0.26
BNIP3-202ENST00000540159 A0A0J9YVX5 310 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 FAM92AA1XBS5 289 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 OR6C75A6NL08 312 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 EEDO75530 441 aaKnown RBP13.43□□□□□ -0.26
BNIP3-202ENST00000540159 ZNF182P17025 639 aaPredicted RBP13.43□□□□□ -0.26
BNIP3-202ENST00000540159 ALDH3B2P48448 385 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 CDK9P50750 372 aaKnown RBP13.43□□□□□ -0.26
BNIP3-202ENST00000540159 CLCN7P51798 805 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 PRMT9Q6P2P2 845 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 SBSNQ6UWP8 590 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 ANKS3Q6ZW76 656 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 SEPT8Q92599 483 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 CGREF1Q99674 301 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 MYOCQ99972 504 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 ZNF711Q9Y462 761 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 A0A087WXM4 84 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 PRMT5O14744 637 aaPredicted RBP13.43□□□□□ -0.26
BNIP3-202ENST00000540159 CLDN11O75508 207 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 RASAL1O95294 804 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 F11P03951 625 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 MYCLP1P12525 358 aaPredicted RBP13.43□□□□□ -0.26
BNIP3-202ENST00000540159 CYP4B1P13584 511 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 GSSP48637 474 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 RING1Q06587 406 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
BNIP3-202ENST00000540159 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 DLEU7Q6UYE1 221 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 GALNT5Q7Z7M9 940 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 LIX1Q8N485 282 aa13.43□□□□□ -0.26
BNIP3-202ENST00000540159 ULK4Q96C45 1275 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms