RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SAPCD2Q86UD0 394 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 RAVER1Q8IY67 606 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 ZCCHC7Q8N3Z6 543 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 MCOLN3Q8TDD5 553 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 EEF1AKMT1Q8WVE0 214 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 STARD8Q92502 1023 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 HTRA1Q92743 480 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 BTBD2Q9BX70 525 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 ACTR8Q9H981 624 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC6A13Q9NSD5 602 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 PLXNB2O15031 1838 aa13.73□□□□□ -0.21
SCNN1A-215ENST00000540037 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 IQCF5A8MTL0 148 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 E2F3O00716 465 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 E2F6O75461 281 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 TBX18O95935 607 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 CAPN1P07384 714 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 MTA1Q13330 715 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 BCL2A1Q16548 175 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 GPRIN3Q6ZVF9 776 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 TMEM86AQ8N2M4 240 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 NSMCE3Q96MG7 304 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 FEM1AQ9BSK4 669 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 RMI1Q9H9A7 625 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ABCC13Q9NSE7 274 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 VNN3Q9NY84 501 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ZIM2Q9NZV7 527 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 TYW5A2RUC4 315 aaKnown RBP13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 CXCL11O14625 94 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 B3GAT3O94766 335 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 POMCP01189 267 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ITGB1P05556 798 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ITIH1P19827 911 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 GRIK1P39086 918 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 CDK5R2Q13319 367 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 NR6A1Q15406 480 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PHKG1Q16816 387 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PLEKHG7Q6ZR37 379 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 DET1Q7L5Y6 550 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 DPP9Q86TI2 863 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 SCAIQ8N9R8 606 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PSMA8Q8TAA3 256 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 RHBDF1Q96CC6 855 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 WDR12Q9GZL7 423 aaKnown RBP13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 DERL2Q9GZP9 239 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 CD274Q9NZQ7 290 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 DNAJB9Q9UBS3 223 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 TMEFF2Q9UIK5 374 aaPredicted RBP13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 SPO11Q9Y5K1 396 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ARL5CA6NH57 179 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 SYCE1LA8MT33 242 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PRMT5O14744 637 aaPredicted RBP13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 B3GALT4O96024 378 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 HMBSP08397 361 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PCSK1P29120 753 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 GJA5P36382 358 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PTPRNQ16849 979 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 AGAP7PQ5VUJ5 663 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 BEND5Q7L4P6 421 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 DPP10Q8N608 796 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PJA1Q8NG27 643 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 GPR152Q8TDT2 470 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 UBE2FQ969M7 185 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PPP1R2P1Q96PQ5 205 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 PSD2Q9BQI7 771 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 TAS2R13Q9NYV9 303 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 SLC25A37Q9NYZ2 338 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ZMYM5Q9UJ78 669 aa13.72□□□□□ -0.21
SCNN1A-215ENST00000540037 ANKRD28O15084 1053 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 GABARAPO95166 117 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 CHRNA1P02708 482 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 PSMB9P28065 219 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 DCTP40126 519 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 MASP1P48740 699 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 GPR15P49685 360 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 BEX3Q00994 111 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 RAD51Q06609 339 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF691Q5VV52 312 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 FAM171BQ6P995 826 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 ADCK1Q86TW2 530 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 SCN4BQ8IWT1 228 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 PIANPQ8IYJ0 282 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF548Q8NEK5 533 aaPredicted RBP13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 METTL6Q8TCB7 284 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 FAM162AQ96A26 154 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 EXOC2Q96KP1 924 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 ZNF229Q9UJW7 825 aa13.71□□□□□ -0.21
SCNN1A-215ENST00000540037 INTS6Q9UL03 887 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms