RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GIMAP2Q9UG22 337 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 SLC2A6Q9UGQ3 507 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 SATB2Q9UPW6 733 aa9.86□□□□□ -0.83
TRAF1-202ENST00000540010 WASH4PA8MWX3 477 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 NOBOXO60393 691 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 TNFRSF21O75509 655 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 OTCP00480 354 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 C1QAP02745 245 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 DDX5P17844 614 aaKnown RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 CYP2A7P20853 494 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 PRDX6P30041 224 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ETV4P43268 484 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 PRKAG1P54619 331 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 EIF4EBP2Q13542 120 aaPredicted RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 PHKG1Q16816 387 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 MBLAC2Q68D91 279 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 DNAJB7Q7Z6W7 309 aaPredicted RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ITIH5Q86UX2 942 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 OR10A6Q8NH74 314 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 TOP1MTQ969P6 601 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 RNFT2Q96EX2 444 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 KIFC1Q9BW19 673 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 DYRK1BQ9Y463 629 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 FAM92AA1XBS5 289 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 SERPINI2O75830 405 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 THRBP10828 461 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 EFNA1P20827 205 aaPredicted RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 GRK3P35626 688 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 SERINC3Q13530 473 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF57Q68EA5 555 aaPredicted RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 CHST15Q7LFX5 561 aaPredicted RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ADAMTSL2Q86TH1 951 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ENKURQ8TC29 256 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 APOLD1Q96LR9 279 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 VPS35Q96QK1 796 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 HDHD2Q9H0R4 259 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 CWH43Q9H720 699 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 A0A0D9SEW6 157 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 HMX2A2RU54 273 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 CLDN11O75508 207 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 FGF1P05230 155 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 OR56A5P0C7T3 313 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 PKMP14618 531 aaKnown RBP9.85□□□□□ -0.83
TRAF1-202ENST00000540010 HNF4AP41235 474 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 CDH4P55283 916 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 TP53BP2Q13625 1128 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ANGPT1Q15389 498 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 TRIQKQ629K1 86 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 AFTPHQ6ULP2 937 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 STK40Q8N2I9 435 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 PLD4Q96BZ4 506 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 ADAMTS6Q9UKP5 1117 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 NEU3Q9UQ49 428 aa9.85□□□□□ -0.83
TRAF1-202ENST00000540010 C2orf78A6NCI8 922 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 VNN2O95498 520 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 RFC2P35250 354 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 PPM1AP35813 382 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 HSPA7P48741 367 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 NADSYN1Q6IA69 706 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 ZNF513Q8N8E2 541 aaPredicted RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 UTP4Q969X6 686 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 SLC47A1Q96FL8 570 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 TRIM8Q9BZR9 551 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 MAGEH1Q9H213 219 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 CIDEBQ9UHD4 219 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 MAGEL2Q9UJ55 1249 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 TBX21Q9UL17 535 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 KLHL20Q9Y2M5 609 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 BBIP1A8MTZ0 92 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 ANGPTL1O95841 491 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 CAPN1P07384 714 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 DHRS4L1P0CG22 281 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 FGF3P11487 239 aaPredicted RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 MERTKQ12866 999 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 LCP2Q13094 533 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 CBX3Q13185 183 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 ACAP2Q15057 778 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 RBM20Q5T481 1227 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 LINGO4Q6UY18 593 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 SLC39A11Q8N1S5 342 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 GRIN3AQ8TCU5 1115 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 IMP4Q96G21 291 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 COX4I2Q96KJ9 171 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 IPPKQ9H8X2 491 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 AGO1Q9UL18 857 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 KIAA0100Q14667 2235 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 HTTP42858 3142 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 MYL12BO14950 172 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 TBL1XO60907 577 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 PFKPQ01813 784 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 PABPC1LQ4VXU2 614 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 KLHL17Q6TDP4 642 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 AHSA2Q719I0 299 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 CPNE9Q8IYJ1 553 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 ARL14EPQ8N8R7 260 aaPredicted RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 TTLL2Q9BWV7 592 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms