RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 GSTT1P30711 240 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 IFFO1Q0D2I5 559 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 TAS2R42Q7RTR8 314 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 TMPRSS9Q7Z410 1059 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 ZC3H3Q8IXZ2 948 aaKnown RBP7.48□□□□□ -1.21
GNE-205ENST00000539815 FNIP1Q8TF40 1166 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 SLC2A13Q96QE2 648 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 STK33Q9BYT3 514 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 ACTR5Q9H9F9 607 aaPredicted RBP7.48□□□□□ -1.21
GNE-205ENST00000539815 WASH6PQ9NQA3 447 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 KLHL8Q9P2G9 620 aaPredicted RBP7.48□□□□□ -1.21
GNE-205ENST00000539815 SHOC2Q9UQ13 582 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 OSGIN2Q9Y236 505 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 DGKBQ9Y6T7 804 aa7.48□□□□□ -1.21
GNE-205ENST00000539815 C5orf42Q9H799 3197 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PFDN6O15212 129 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 DKK1O94907 266 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 F3P13726 295 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ERCC2P18074 760 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 HLA-DPA1P20036 260 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ETV3P41162 512 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 AIF1P55008 147 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 MAXP61244 160 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CDK3Q00526 305 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 COX10Q12887 443 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 IGF2-ASQ6U949 168 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 NT5DC3Q86UY8 548 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 AMZ2Q86W34 360 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CEP97Q8IW35 865 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 SLC22A18ASQ8N1D0 253 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 SLC20A1Q8WUM9 679 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PATE1Q8WXA2 126 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 GFM2Q969S9 779 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 WDR24Q96S15 920 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 SRMSQ9H3Y6 488 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PPARGC1AQ9UBK2 798 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 RWDD2AQ9UIY3 292 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PCDHGC3Q9UN70 934 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 IGHV5-10-1A0A0J9YXX1 117 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ISM1B1AKI9 464 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TTI1O43156 1089 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ZNF254O75437 659 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 UBXN7O94888 489 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 NR1D1P20393 614 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 SKIV2L2P42285 1042 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 AP2B1P63010 937 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 IL10RBQ08334 325 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TBL3Q12788 808 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 IL11RAQ14626 422 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TAF11Q15544 211 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TMEM154Q6P9G4 183 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 WDR59Q6PJI9 974 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TRIM59Q8IWR1 403 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 KREMEN1Q96MU8 473 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CARD9Q9H257 536 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 LATS2Q9NRM7 1088 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 OCIAD1Q9NX40 245 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.47□□□□□ -1.21
GNE-205ENST00000539815 F8P00451 2351 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 A0A1B0GUH1 482 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CCDC78A2IDD5 438 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 C21orf140B9A014 251 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 AREL1O15033 823 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CELA2BP08218 269 aaPredicted RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 ABOP16442 354 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 BTF3P20290 206 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 RPL10P27635 214 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 S100A5P33763 92 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 RIPPLY3P57055 190 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 UBE2HP62256 183 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CCDC38Q502W7 563 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 IGSF11Q5DX21 431 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ANKRD20A2Q5SQ80 823 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ERMARDQ5T6L9 678 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ANKRD20A1Q5TYW2 823 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ANKRD20A3Q5VUR7 823 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 GFRALQ6UXV0 394 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 ADCK2Q7Z695 626 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TMTC1Q8IUR5 882 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 RNF10Q8N5U6 811 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 DTX3Q8N9I9 347 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 NOA1Q8NC60 698 aaKnown RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 CCL4L1Q8NHW4 92 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 METTL21AQ8WXB1 218 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 TCF12Q99081 682 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 CHST11Q9NPF2 352 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 SCHIP1Q9P0W5 487 aaPredicted RBP7.47□□□□□ -1.21
GNE-205ENST00000539815 SLC39A10Q9ULF5 831 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PSMD13Q9UNM6 376 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PCDHGB7Q9Y5F8 929 aa7.47□□□□□ -1.21
GNE-205ENST00000539815 PRSS47A8MTI9 375 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 HMGB1P1B2RPK0 211 aaPredicted RBP7.46□□□□□ -1.21
GNE-205ENST00000539815 INSIG1O15503 277 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 SPINT1O43278 529 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 SOCS5O75159 536 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 PMPCBO75439 489 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 FGF3P11487 239 aaPredicted RBP7.46□□□□□ -1.21
GNE-205ENST00000539815 COL6A2P12110 1019 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 AP1B1Q10567 949 aa7.46□□□□□ -1.21
GNE-205ENST00000539815 SRSF6Q13247 344 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms