RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ITCHQ96J02 903 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 MUS81Q96NY9 551 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ATXN10Q9UBB4 475 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 FAM8A1Q9UBU6 413 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 CIDEBQ9UHD4 219 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 SLC30A1Q9Y6M5 507 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ILVBLA1L0T0 632 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 SLC25A14O95258 325 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 TFPTP0C1Z6 253 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 MYF6P23409 242 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 TRAF3Q13114 568 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 LAPTM4AQ15012 233 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 C5orf22Q49AR2 442 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ADGRF1Q5T601 910 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 INTS11Q5TA45 600 aaKnown RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 TXNDC8Q6A555 127 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 SPRED1Q7Z699 444 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ANKRD46Q86W74 232 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ZSWIM9Q86XI8 627 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 CD99L2Q8TCZ2 262 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 KCNJ9Q92806 393 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 P2RY12Q9H244 342 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 ASB8Q9H765 288 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 SLC8A2Q9UPR5 921 aa13.84□□□□□ -0.19
UBE3B-210ENST00000539599 RANBP2P49792 3224 aaKnown RBP13.84□□□□□ -0.19
UBE3B-210ENST00000539599 C1orf232A0A0U1RR37 186 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 H0YJX3 145 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 IL7RP16871 459 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 PRKACGP22612 351 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 ENTPD1P49961 510 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 EMP3P54852 163 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 SMAD3P84022 425 aaKnown RBP13.83□□□□□ -0.19
UBE3B-210ENST00000539599 PRKG2Q13237 762 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 TAF12Q16514 161 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 FAM174BQ3ZCQ3 159 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 TPGS1Q6ZTW0 290 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.19
UBE3B-210ENST00000539599 MFSD2AQ8NA29 543 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 GFM2Q969S9 779 aaKnown RBP13.83□□□□□ -0.19
UBE3B-210ENST00000539599 ISG20Q96AZ6 181 aaKnown RBP13.83□□□□□ -0.19
UBE3B-210ENST00000539599 C9orf16Q9BUW7 83 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 NPLQ9BXD5 320 aaPredicted RBP13.83□□□□□ -0.19
UBE3B-210ENST00000539599 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 POLR1BQ9H9Y6 1135 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 SMPD3Q9NY59 655 aaPredicted RBP13.83□□□□□ -0.19
UBE3B-210ENST00000539599 AASSQ9UDR5 926 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 U3KQV3 271 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 DOCK6Q96HP0 2047 aa13.83□□□□□ -0.19
UBE3B-210ENST00000539599 A0A1W2PPW3 197 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 FAM234BA2RU67 622 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ANKRD33BA6NCL7 494 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ARVCFO00192 962 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ANKRD28O15084 1053 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 LDLRP01130 860 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 MBL2P11226 248 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 GJA1P17302 382 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 CDK9P50750 372 aaKnown RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 NEK2P51955 445 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 EMX2Q04743 252 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 SPANXN4Q5MJ08 99 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 GPR141Q7Z602 305 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 STK32CQ86UX6 486 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 TMBIM1Q969X1 311 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 NSMCE2Q96MF7 247 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ZNF382Q96SR6 550 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 CLSTN3Q9BQT9 956 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 FEM1AQ9BSK4 669 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 SEZ6LQ9BYH1 1024 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 MRGBPQ9NV56 204 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 PKP3Q9Y446 797 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 A0A1W2PQ67 120 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 UPK1AO00322 258 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 PRMT5O14744 637 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 PAX3P23760 479 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 HMOX2P30519 316 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 NKX3-2P78367 333 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 RAB39AQ14964 217 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 PDCD4Q53EL6 469 aaKnown RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 LRRC23Q53EV4 343 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 SUSD1Q6UWL2 747 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ANKS3Q6ZW76 656 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 DET1Q7L5Y6 550 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 GALNT10Q86SR1 603 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 HID1Q8IV36 788 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 DHRSXQ8N5I4 330 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ABTB1Q969K4 478 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 PYCR2Q96C36 320 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 CGREF1Q99674 301 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 THUMPD3Q9BV44 507 aaKnown RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 SMG9Q9H0W8 520 aaKnown RBP13.83□□□□□ -0.2
UBE3B-210ENST00000539599 HACD3Q9P035 362 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 PADI4Q9UM07 663 aa13.83□□□□□ -0.2
UBE3B-210ENST00000539599 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-210ENST00000539599 SREBF2Q12772 1141 aa13.82□□□□□ -0.2
UBE3B-210ENST00000539599 FGD3Q5JSP0 725 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms