RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 FBXO6Q9NRD1 293 aaPredicted RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 IARS2Q9NSE4 1012 aaKnown RBP15.41■□□□□ 0.06
RPAIN-206ENST00000539417 OGFRQ9NZT2 677 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 WHRNQ9P202 907 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 GALPQ9UBC7 116 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 CRYL1Q9Y2S2 319 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 ENTPD2Q9Y5L3 495 aa15.41■□□□□ 0.06
RPAIN-206ENST00000539417 UBA6A0AVT1 1052 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 OR5K4A6NMS3 321 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 C1QTNF9BB2RNN3 333 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 BHMG1C9JSJ3 638 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 D6RAR5 112 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 E7ESA3 106 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 PRMT5O14744 637 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 NDUFS3O75489 264 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 C1QTNF9P0C862 333 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 PAMP19021 973 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 MPSTP25325 297 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 FMO4P31512 558 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 EIF3BP55884 814 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ARL4CP56559 192 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 BIRC2Q13490 618 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 SPIDRQ14159 915 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 GPR18Q14330 331 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ISXQ2M1V0 245 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 AARS2Q5JTZ9 985 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 MRNIPQ6NTE8 343 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 C8orf74Q6P047 294 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ZNF549Q6P9A3 640 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 MMGT1Q8N4V1 131 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 PHC3Q8NDX5 983 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 FBXO25Q8TCJ0 367 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ELMO1Q92556 727 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 FAM136AQ96C01 138 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ATXN7L3BQ96GX2 97 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 C12orf66Q96MD2 445 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 SLC38A3Q99624 504 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 SEMA6CQ9H3T2 930 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 IMP3Q9NV31 184 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 KCNK4Q9NYG8 393 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 DMGDHQ9UI17 866 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 CDYLQ9Y232 598 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 UNC13CQ8NB66 2214 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 SLC5A10A0PJK1 596 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 NIPSNAP2O75323 286 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 VIPP01282 170 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 OR56A5P0C7T3 313 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 MTHFD1P11586 935 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 SLC2A4P14672 509 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 OGNP20774 298 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 MAPK9P45984 424 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 GPR3P46089 330 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 PLTPP55058 493 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 BOP1Q14137 746 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 RBM44Q6ZP01 1051 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 TMEM26Q6ZUK4 368 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 KCNMB4Q86W47 210 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 TRIM48Q8IWZ4 208 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 FBXO36Q8NEA4 188 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 CXorf40BQ96DE9 158 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 TTC1Q99614 292 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 CARD6Q9BX69 1037 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ZC3H7BQ9UGR2 993 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 ACSL5Q9ULC5 683 aa15.4■□□□□ 0.06
RPAIN-206ENST00000539417 UTP11Q9Y3A2 253 aaKnown RBP15.4■□□□□ 0.06
RPAIN-206ENST00000539417 KIF26BQ2KJY2 2108 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 CHD8Q9HCK8 2581 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 TRABD2BA6NFA1 517 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 SMAPO00193 183 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 FTH1P02794 183 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 SLC35G4P0C7Q5 338 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 TYRP1P17643 537 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 RPS3P23396 243 aaKnown RBP eCLIP15.39■□□□□ 0.05
RPAIN-206ENST00000539417 GABRB3P28472 473 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 HALP42357 657 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 ABCG1P45844 678 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 FOXK2Q01167 660 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 CALCOCO2Q13137 446 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 CBLBQ13191 982 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 THOC5Q13769 683 aaKnown RBP15.39■□□□□ 0.05
RPAIN-206ENST00000539417 SPANXN3Q5MJ09 141 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 STEAP4Q687X5 459 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 PTRHD1Q6GMV3 140 aaKnown RBP15.39■□□□□ 0.05
RPAIN-206ENST00000539417 CNSTQ6PJW8 725 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 SDCCAG8Q86SQ7 713 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-206ENST00000539417 SLITRK4Q8IW52 837 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 BBOF1Q8ND07 529 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 SLC30A3Q99726 388 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 RAB17Q9H0T7 212 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 EPB41L5Q9HCM4 733 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 POT1Q9NUX5 634 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 FBXO5Q9UKT4 447 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 MED16Q9Y2X0 877 aa15.39■□□□□ 0.05
RPAIN-206ENST00000539417 CTAGE15A4D2H0 777 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 TCEA3O75764 348 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 PIAS1O75925 651 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 HAUS5O94927 633 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 CTAGE8P0CG41 777 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 AOAHP28039 575 aa15.38■□□□□ 0.05
RPAIN-206ENST00000539417 PPP1CAP62136 330 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms