RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 KLHL33A6NCF5 533 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 OR5K3A6NET4 321 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ZNF891A8MT65 544 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 B8ZZF3 427 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 NKX2-8O15522 239 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PSMD3O43242 534 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PRKAR1AP10644 381 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 NELFEP18615 380 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ACRV1P26436 265 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ARCN1P48444 511 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ABHD18Q0P651 414 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KCNAB1Q14722 419 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GPR33Q49SQ1 333 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 DNTTIP2Q5QJE6 756 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SERPINA9Q86WD7 417 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ESX1Q8N693 406 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GALNT6Q8NCL4 622 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 HM13Q8TCT9 377 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 HEXDCQ8WVB3 486 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 C1orf54Q8WWF1 131 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CDKN2AIPNLQ96HQ2 116 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 MAP3K3Q99759 626 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 C19orf43Q9BQ61 176 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TRIT1Q9H3H1 467 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 HRASLS2Q9NWW9 162 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ZDHHC3Q9NYG2 299 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SLC24A2Q9UI40 661 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 GCN1Q92616 2671 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ZNF462Q96JM2 2506 aa18.61■□□□□ 0.57
TNFRSF1A-212ENST00000539372 COL6A6A6NMZ7 2263 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 OR6C74A6NCV1 312 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 LIASO43766 372 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KIAA0754O94854 1291 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 IFNB1P01574 187 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 STAT5AP42229 794 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SNX1Q13596 522 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KRT33BQ14525 404 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 IL11RAQ14626 422 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CCDC38Q502W7 563 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CAPRIN2Q6IMN6 1127 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 BORAQ6PGQ7 559 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 C6orf15Q6UXA7 325 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PRUNE1Q86TP1 453 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 PIANPQ8IYJ0 282 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 OR52K1Q8NGK4 314 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 STYXQ8WUJ0 223 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 UBXN4Q92575 508 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SLC45A3Q96JT2 553 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ALS2CR12Q96Q35 445 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CCM2Q9BSQ5 444 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KIR3DX1Q9H7L2 352 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 LNPEPQ9UIQ6 1025 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 RPS6KL1Q9Y6S9 549 aa18.6■□□□□ 0.57
TNFRSF1A-212ENST00000539372 IGLV3-16A0A075B6K0 115 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TRBV5-4A0A0C4DH59 114 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 UBA6A0AVT1 1052 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 H7C0S8 307 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 KRT86O43790 486 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SPAG6O75602 509 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ZIC2O95409 532 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ETS1P14921 441 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 FOLR1P15328 257 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CACNG1Q06432 222 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 MAP7Q14244 749 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 OASLQ15646 514 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 DBN1Q16643 649 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ARMC6Q6NXE6 501 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 OOSP2Q86WS3 158 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SLC13A5Q86YT5 568 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 CLDN19Q8N6F1 224 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SIDT2Q8NBJ9 832 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 STAMBPL1Q96FJ0 436 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SLC41A2Q96JW4 573 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 EFHD1Q9BUP0 239 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 COG4Q9H9E3 785 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 ETNK1Q9HBU6 452 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 SEMA5BQ9P283 1151 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 MRPS18BQ9Y676 258 aaKnown RBP18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 COLEC10Q9Y6Z7 277 aa18.59■□□□□ 0.57
TNFRSF1A-212ENST00000539372 TLCD2A6NGC4 264 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 MROH6A6NGR9 719 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 OR51F1A6NGY5 319 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 PYCARD-AS1I3L0S3 204 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 EBLN1P0CF75 366 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 FGF5P12034 268 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ITGB6P18564 788 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 F8A1P23610 371 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 STIP1P31948 543 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 LMAN1P49257 510 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ARL4DP49703 201 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 GSDMDP57764 484 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 NFKB2Q00653 900 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TUBB3Q13509 450 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 FBXO38Q6PIJ6 1188 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 LINC00523Q86TU6 105 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 PPP1R3BQ86XI6 285 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 DNAAF3Q8N9W5 541 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 OR4E2Q8NGC2 313 aa18.58■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ZFPM2Q8WW38 1151 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms