RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GFI1Q99684 422 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 FZD8Q9H461 694 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 ACTL8Q9H568 366 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RPAP3Q9H6T3 665 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MAGEF1Q9HAY2 307 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 NOX4Q9NPH5 578 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MKKSQ9NPJ1 570 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PRMT8Q9NR22 394 aaPredicted RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RHCGQ9UBD6 479 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 CACNG4Q9UBN1 327 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 MRPS2Q9Y399 296 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 RAD54L2Q9Y4B4 1467 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 DNAH3Q8TD57 4116 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PPRC1Q5VV67 1664 aaKnown RBP1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PFASO15067 1338 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 NCAPD2Q15021 1401 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 PRAG1Q86YV5 1406 aa1.03□□□□□ -2.24
HIF1A-204ENST00000539097 A4D1N5 150 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 GLTPD2A6NH11 291 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SRRM3A6NNA2 597 aaPredicted RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 B4DGG1 531 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 VCYO14598 125 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 TCERG1O14776 1098 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SPINT2O43291 252 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 ATP2C2O75185 946 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CELF2O95319 508 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 BCL10O95999 233 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SNRPCP09234 159 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 VPREB1P12018 145 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CD59P13987 128 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 HOXD10P28358 340 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 MPGP29372 298 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 LIG4P49917 911 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 FOXG1P55316 489 aaPredicted RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 TUBB4BP68371 445 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DLK1P80370 383 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 ID2Q02363 134 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 GABPAQ06546 454 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 TRAF3Q13114 568 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 HYAL4Q2M3T9 481 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 LSM12Q3MHD2 195 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 AMZ1Q400G9 498 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 Q4G0T1 1027 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 TEX35Q5T0J7 233 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 C10orf25Q5T742 122 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 C6orf163Q5TEZ5 329 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 NSUN5P2Q63ZY6 315 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 ADALQ6DHV7 355 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 MOXD1Q6UVY6 613 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CTU1Q7Z7A3 348 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 METTL23Q86XA0 190 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SCYL3Q8IZE3 742 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF444Q8N0Y2 327 aaPredicted RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 KCNH5Q8NCM2 988 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 MCUQ8NE86 351 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DNAAF1Q8NEP3 725 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SLC26A7Q8TE54 656 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SAP25Q8TEE9 199 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DEPDC1BQ8WUY9 529 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 NSMCE1Q8WV22 266 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC107Q8WV48 283 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SLC44A1Q8WWI5 657 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 LYZL4Q96KX0 146 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DGAT2Q96PD7 388 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 WDR77Q9BQA1 342 aaPredicted RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 ABHD14AQ9BUJ0 271 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DCLK3Q9C098 648 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 PRSS22Q9GZN4 317 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 FAM234AQ9H0X4 552 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CSTL1Q9H114 145 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 EBF3Q9H4W6 596 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 SLITRK6Q9H5Y7 841 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 NOL11Q9H8H0 719 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CPNE5Q9HCH3 593 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 MMP25Q9NPA2 562 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 GSN-AS1Q9NRJ2 163 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 C6orf203Q9P0P8 240 aaPredicted RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 IL36AQ9UHA7 158 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DBNLQ9UJU6 430 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 TLK1Q9UKI8 766 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 RNF6Q9Y252 685 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 EIF3LQ9Y262 564 aaKnown RBP1.03□□□□□ -2.25
HIF1A-204ENST00000539097 DMRT1Q9Y5R6 373 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 A3GALT2U3KPV4 340 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 CEP164Q9UPV0 1460 aa1.03□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1W2PPK0 400 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TRBC2A0A5B9 178 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MED19A0JLT2 244 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 DPPA5A6NC42 116 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM150CB9EJG8 249 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC16A5O15375 505 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 OGG1O15527 345 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SEC14L5O43304 696 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SRPX2O60687 465 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TOMM40O96008 361 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ICAM1P05362 532 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CELA2AP08217 269 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RAB40ALP0C0E4 278 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SFTPCP11686 197 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MYL6BP14649 208 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms