RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 C12orf66Q96MD2 445 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 NAP1L3Q99457 506 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 CCM2Q9BSQ5 444 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 IL22Q9GZX6 179 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 DDX47Q9H0S4 455 aaKnown RBP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 ACSL5Q9ULC5 683 aa12.87□□□□□ -0.35
PRKDC-206ENST00000536429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 MN1Q10571 1320 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-206ENST00000536429 MGAQ8IWI9 3026 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 RRP8O43159 456 aaKnown RBP12.86□□□□□ -0.35
PRKDC-206ENST00000536429 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
PRKDC-206ENST00000536429 AMD1P17707 334 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 NSG1P42857 185 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 ABCG1P45844 678 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 NPY2RP49146 381 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 FNTAP49354 379 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 PRAMEP78395 509 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 CDK16Q00536 496 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 TLE3Q04726 772 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 TRA2AQ13595 282 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKDC-206ENST00000536429 LAMB3Q13751 1172 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 ITIH4Q14624 930 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 TGIF1Q15583 401 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
PRKDC-206ENST00000536429 CAPRIN2Q6IMN6 1127 aaKnown RBP12.86□□□□□ -0.35
PRKDC-206ENST00000536429 PACS1Q6VY07 963 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 CREG2Q8IUH2 290 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 AGGF1Q8N302 714 aaeCLIP12.86□□□□□ -0.35
PRKDC-206ENST00000536429 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 LKAAEAR1Q8TD35 194 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 TMEM159Q96B96 161 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 MFSD3Q96ES6 412 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 DPYSL5Q9BPU6 564 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 KIFC1Q9BW19 673 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 OR52A5Q9H2C5 316 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 PCDHGA7Q9Y5G6 932 aa12.86□□□□□ -0.35
PRKDC-206ENST00000536429 C17orf113A0A1B0GUU1 675 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 EFCAB7A8K855 629 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 IQCF5A8MTL0 148 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 GOLGA8KD6RF30 607 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 GOLGA8TH3BQL2 631 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 CAPN5O15484 640 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 KLK10O43240 276 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 AP2A2O94973 939 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 C9P02748 559 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 F7P08709 466 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 SLC35G4P0C7Q5 338 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 TCP1P17987 556 aaKnown RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 ITGB6P18564 788 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 MLLT3P42568 568 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 CAPZBP47756 277 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 SRSF6Q13247 344 aaKnown RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 CLN3Q13286 438 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 BRD3Q15059 726 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 FASTKD1Q53R41 847 aaKnown RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 ZFAND4Q86XD8 727 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 RBM12BQ8IXT5 1001 aaKnown RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 BMPERQ8N8U9 685 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 NAT8LQ8N9F0 302 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 KCNE4Q8WWG9 221 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 PEX13Q92968 403 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 ART4Q93070 314 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 RNF31Q96EP0 1072 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 C9orf72Q96LT7 481 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 NAPGQ99747 312 aaPredicted RBP12.85□□□□□ -0.35
PRKDC-206ENST00000536429 EPB41L1Q9H4G0 881 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 CATSPERZQ9NTU4 200 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 SOX13Q9UN79 622 aa12.85□□□□□ -0.35
PRKDC-206ENST00000536429 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 GOLGA6L10A0A0M3HER8 536 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 KLHL33A6NCF5 533 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 CD3EAPO15446 510 aaKnown RBP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 PTGIRP43119 386 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 ARCN1P48444 511 aaKnown RBP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 PLXDC1Q8IUK5 500 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 PHC3Q8NDX5 983 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 ELMO1Q92556 727 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 SGSM3Q96HU1 749 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 FCRL3Q96P31 734 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 SERPINB12Q96P63 405 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 CTRCQ99895 268 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 MRM3Q9HC36 420 aaKnown RBP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 APMAPQ9HDC9 416 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 AKAP7Q9P0M2 348 aaPredicted RBP12.84□□□□□ -0.35
PRKDC-206ENST00000536429 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
PRKDC-206ENST00000536429 B3GALT1Q9Y5Z6 326 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms