RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 NEUROG3Q9Y4Z2 214 aa17.5■□□□□ 0.39
DDX55-204ENST00000536079 SLC5A10A0PJK1 596 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 PMS2P1A4D2B8 440 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 OR5K4A6NMS3 321 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 PRMT5O14744 637 aaPredicted RBP17.49■□□□□ 0.39
DDX55-204ENST00000536079 CSO75390 466 aaKnown RBP17.49■□□□□ 0.39
DDX55-204ENST00000536079 OR56A5P0C7T3 313 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 SLC1A2P43004 574 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 PLTPP55058 493 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 CSE1LP55060 971 aaKnown RBP17.49■□□□□ 0.39
DDX55-204ENST00000536079 EIF3BP55884 814 aaKnown RBP17.49■□□□□ 0.39
DDX55-204ENST00000536079 CBLBQ13191 982 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 BIRC2Q13490 618 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 TUBB2AQ13885 445 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 MRNIPQ6NTE8 343 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 ZNF549Q6P9A3 640 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 KCNMB4Q86W47 210 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 GALNT15Q8N3T1 639 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 BBOF1Q8ND07 529 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 FBXO36Q8NEA4 188 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 FBXO25Q8TCJ0 367 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 SEC14L1Q92503 715 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 ELMO1Q92556 727 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 C12orf66Q96MD2 445 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 TTC1Q99614 292 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 SLC38A3Q99624 504 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 TUBB2BQ9BVA1 445 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 CARD6Q9BX69 1037 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 FOXP3Q9BZS1 431 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 SLC40A1Q9NP59 571 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 KCNK4Q9NYG8 393 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 ZC3H7BQ9UGR2 993 aaKnown RBP17.49■□□□□ 0.39
DDX55-204ENST00000536079 ACSL5Q9ULC5 683 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 CDYLQ9Y232 598 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 MSRB2Q9Y3D2 182 aa17.49■□□□□ 0.39
DDX55-204ENST00000536079 UBA6A0AVT1 1052 aaPredicted RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 CTAGE15A4D2H0 777 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 D6RAR5 112 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 VIPP01282 170 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 CTAGE8P0CG41 777 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 MTHFD1P11586 935 aaKnown RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 SLC2A4P14672 509 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 OGNP20774 298 aaKnown RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 RPS3P23396 243 aaKnown RBP eCLIP17.48■□□□□ 0.39
DDX55-204ENST00000536079 MPSTP25325 297 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 GABRB3P28472 473 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 GPR3P46089 330 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 GUCY2DQ02846 1103 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 CALCOCO2Q13137 446 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 THOC5Q13769 683 aaKnown RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 SPIDRQ14159 915 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 GPR18Q14330 331 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 ISXQ2M1V0 245 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 SPANXN3Q5MJ09 141 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 RBM44Q6ZP01 1051 aaKnown RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 TMEM26Q6ZUK4 368 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 SDCCAG8Q86SQ7 713 aaPredicted RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 CTAGE6Q86UF2 777 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 CTAGE4Q8IX94 777 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 PHC3Q8NDX5 983 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 GATA6Q92908 595 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 FAM136AQ96C01 138 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 GFM1Q96RP9 751 aaKnown RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 RAB17Q9H0T7 212 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 SEMA6CQ9H3T2 930 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 EPB41L5Q9HCM4 733 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 IMP3Q9NV31 184 aaKnown RBP17.48■□□□□ 0.39
DDX55-204ENST00000536079 ENTPD2Q9Y5L3 495 aa17.48■□□□□ 0.39
DDX55-204ENST00000536079 AGRPO00253 132 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 NIPSNAP2O75323 286 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 HAUS5O94927 633 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 FTH1P02794 183 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 ABCG1P45844 678 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 MAPK9P45984 424 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 BOP1Q14137 746 aaKnown RBP17.47■□□□□ 0.39
DDX55-204ENST00000536079 PTRHD1Q6GMV3 140 aaKnown RBP17.47■□□□□ 0.39
DDX55-204ENST00000536079 CNSTQ6PJW8 725 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 TRIM48Q8IWZ4 208 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 ZBED8Q8IZ13 594 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 CACTIN-AS1Q8N1I8 211 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 MNS1Q8NEH6 495 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 LRRC39Q96DD0 335 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 CXorf40BQ96DE9 158 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 ATXN7L3BQ96GX2 97 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 TCF12Q99081 682 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 SAYSD1Q9NPB0 183 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 ZDHHC18Q9NUE0 388 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 POT1Q9NUX5 634 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 FBXO5Q9UKT4 447 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 MED16Q9Y2X0 877 aa17.47■□□□□ 0.39
DDX55-204ENST00000536079 KLHL33A6NCF5 533 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 C1QTNF9BB2RNN3 333 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 GPC4O75487 556 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 TCEA3O75764 348 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 PIAS1O75925 651 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 TTC4O95801 387 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 SLC35G4P0C7Q5 338 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 C1QTNF9P0C862 333 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 TYRP1P17643 537 aa17.46■□□□□ 0.39
DDX55-204ENST00000536079 AOAHP28039 575 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms