RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.36
RTN3-207ENST00000536011 DET1Q7L5Y6 550 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 UBL4BQ8N7F7 174 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 TTC13Q8NBP0 860 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 GPR150Q8NGU9 434 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 ELMO2Q96JJ3 720 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 LINC00615Q96LM1 132 aaPredicted RBP12.83□□□□□ -0.36
RTN3-207ENST00000536011 C12orf66Q96MD2 445 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 SPATA13Q96N96 652 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 CCM2Q9BSQ5 444 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 CROTQ9UKG9 612 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 PADI1Q9ULC6 663 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 TFR2Q9UP52 801 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 OR5K3A6NET4 321 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 SOWAHDA6NJG2 315 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 C21orf140B9A014 251 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 MATN2O00339 956 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 RECKO95980 971 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 ZNF28P17035 718 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
RTN3-207ENST00000536011 HSD11B2P80365 405 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 NFKB2Q00653 900 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 PRKAA1Q13131 559 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 GPR33Q49SQ1 333 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 TMTC4Q5T4D3 741 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 ARHGEF18Q6ZSZ5 1173 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 KIAA1328Q86T90 577 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 OR8K5Q8NH50 307 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 COPS8Q99627 209 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 TBL1YQ9BQ87 522 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 TRIM4Q9C037 500 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 WWP1Q9H0M0 922 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 KIR3DX1Q9H7L2 352 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 FANCEQ9HB96 536 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 HRASLS2Q9NWW9 162 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 FKBPLQ9UIM3 349 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 POLHQ9Y253 713 aa12.82□□□□□ -0.36
RTN3-207ENST00000536011 IGHV5-51A0A0C4DH38 117 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
RTN3-207ENST00000536011 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 MAP3K7O43318 606 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 KATNA1O75449 491 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
RTN3-207ENST00000536011 GSTM1P09488 218 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 PRLHRP49683 370 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 ZNF75DP51815 510 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 VAV2P52735 878 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 ZNF140P52738 457 aaPredicted RBP12.81□□□□□ -0.36
RTN3-207ENST00000536011 GSTM4Q03013 218 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 DNASE1L3Q13609 305 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 LACTB2Q53H82 288 aaPredicted RBP12.81□□□□□ -0.36
RTN3-207ENST00000536011 SNX20Q7Z614 316 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 NXPE1Q8N323 547 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 APOL2Q9BQE5 337 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 GORASP1Q9BQQ3 440 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 ARNT2Q9HBZ2 717 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 LHX9Q9NQ69 397 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 FGF21Q9NSA1 209 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 FAM8A1Q9UBU6 413 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 SLC24A2Q9UI40 661 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 PCDHGA6Q9Y5G7 932 aa12.81□□□□□ -0.36
RTN3-207ENST00000536011 CFAP20Q9Y6A4 193 aaKnown RBP12.81□□□□□ -0.36
RTN3-207ENST00000536011 C17orf113A0A1B0GUU1 675 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 AGAP14A8MT82 685 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 IFRD1O00458 451 aaPredicted RBP12.8□□□□□ -0.36
RTN3-207ENST00000536011 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
RTN3-207ENST00000536011 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
RTN3-207ENST00000536011 TUBB4BP68371 445 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 XIAPP98170 497 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 TLE1Q04724 770 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 TUBB2AQ13885 445 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 P3H1Q32P28 736 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 PTRH1Q86Y79 214 aaKnown RBP12.8□□□□□ -0.36
RTN3-207ENST00000536011 CFAP206Q8IYR0 622 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 D2HGDHQ8N465 521 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 INSM2Q96T92 566 aaPredicted RBP12.8□□□□□ -0.36
RTN3-207ENST00000536011 MAP3K3Q99759 626 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 TUBB2BQ9BVA1 445 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 GPR87Q9BY21 358 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 TWSG1Q9GZX9 223 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 LRRC40Q9H9A6 602 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 SOHLH2Q9NX45 425 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 AMFRQ9UKV5 643 aa12.8□□□□□ -0.36
RTN3-207ENST00000536011 PIPSLA2A3N6 862 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
RTN3-207ENST00000536011 RCCD1A6NED2 376 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms