RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MED16Q9Y2X0 877 aa15.94■□□□□ 0.14
VAMP1-205ENST00000535927 CABIN1Q9Y6J0 2220 aa15.94■□□□□ 0.14
VAMP1-205ENST00000535927 NIPSNAP2O75323 286 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 LMNAP02545 664 aaKnown RBP15.93■□□□□ 0.14
VAMP1-205ENST00000535927 ALDOAP04075 364 aaKnown RBP15.93■□□□□ 0.14
VAMP1-205ENST00000535927 ZNF806P0C7X5 589 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 CCR7P32248 378 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SLCO1A2P46721 670 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 CCT5P48643 541 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 CDKN2DP55273 166 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 ATP6V0D1P61421 351 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SMAD1Q15797 465 aaKnown RBP15.93■□□□□ 0.14
VAMP1-205ENST00000535927 FAM83EQ2M2I3 478 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 TSNAXIP1Q2TAA8 658 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SYTL3Q4VX76 610 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 TPRG1LQ5T0D9 272 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 AGBL2Q5U5Z8 902 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 ABRAXAS1Q6UWZ7 409 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 RAPH1Q70E73 1250 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 CHST15Q7LFX5 561 aaPredicted RBP15.93■□□□□ 0.14
VAMP1-205ENST00000535927 TBC1D1Q86TI0 1168 aaPredicted RBP15.93■□□□□ 0.14
VAMP1-205ENST00000535927 CFAP206Q8IYR0 622 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SLC22A15Q8IZD6 547 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 PHC3Q8NDX5 983 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 CD200R1Q8TD46 325 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 MZB1Q8WU39 189 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 ZFPM2Q8WW38 1151 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 PDXPQ96GD0 296 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 UBXN10Q96LJ8 280 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 FOPNLQ96NB1 174 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 NDNQ99608 321 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SH3GL2Q99962 352 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 DERL2Q9GZP9 239 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 COG4Q9H9E3 785 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 NMRAL1Q9HBL8 299 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 TMBIM4Q9HC24 238 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SNX15Q9NRS6 342 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 APOBEC3BQ9UH17 382 aaKnown RBP15.93■□□□□ 0.14
VAMP1-205ENST00000535927 HEBP2Q9Y5Z4 205 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 SLCO1B1Q9Y6L6 691 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 DMDP11532 3685 aa15.93■□□□□ 0.14
VAMP1-205ENST00000535927 TDRD6O60522 2096 aaKnown RBP15.92■□□□□ 0.14
VAMP1-205ENST00000535927 A0A096LPK6 155 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 LMO7DNF2Z398 122 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 SLC16A5O15375 505 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 WISP3O95389 354 aaPredicted RBP15.92■□□□□ 0.14
VAMP1-205ENST00000535927 RPN2P04844 631 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 CFIP05156 583 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 C2P06681 752 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 ZNF37AP17032 561 aaPredicted RBP15.92■□□□□ 0.14
VAMP1-205ENST00000535927 NDUFS1P28331 727 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 TIAL1Q01085 375 aaKnown RBP eCLIP15.92■□□□□ 0.14
VAMP1-205ENST00000535927 CTBSQ01459 385 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 SUZ12Q15022 739 aaKnown RBP15.92■□□□□ 0.14
VAMP1-205ENST00000535927 KLC3Q6P597 504 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 CRTC3Q6UUV7 619 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 RD3Q7Z3Z2 195 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 TRABD2AQ86V40 505 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 MAGEC3Q8TD91 643 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 ATXN7L3BQ96GX2 97 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 OLFM1Q99784 485 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 DUSP23Q9BVJ7 150 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 ARRDC1-AS1Q9H2J1 176 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 MRPL40Q9NQ50 206 aaKnown RBP15.92■□□□□ 0.14
VAMP1-205ENST00000535927 KLC4Q9NSK0 619 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 MKS1Q9NXB0 559 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 TBK1Q9UHD2 729 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 PCDHGB2Q9Y5G2 931 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 SNX11Q9Y5W9 270 aa15.92■□□□□ 0.14
VAMP1-205ENST00000535927 CACNA1BQ00975 2339 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 TP53BP1Q12888 1972 aaPredicted RBP15.91■□□□□ 0.14
VAMP1-205ENST00000535927 A0A1B0GTQ1 180 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 IFRD1O00458 451 aaPredicted RBP15.91■□□□□ 0.14
VAMP1-205ENST00000535927 PCDHGA12O60330 932 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 KDM1AO60341 852 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 RFPL1O75677 317 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 PIAS2O75928 621 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 KLHL2O95198 593 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 LTA4HP09960 611 aaKnown RBP15.91■□□□□ 0.14
VAMP1-205ENST00000535927 ACP5P13686 325 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 HALP42357 657 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 SLC18A2Q05940 514 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 HSPA14Q0VDF9 509 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 GRIK2Q13002 908 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 UAP1L1Q3KQV9 507 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 PAQR3Q6TCH7 311 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 UNC5DQ6UXZ4 953 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 KRT222Q8N1A0 295 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 MYO1HQ8N1T3 1032 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 PNPLA1Q8N8W4 532 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 SMC6Q96SB8 1091 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 TMEM168Q9H0V1 697 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 MED4Q9NPJ6 270 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 NCKIPSDQ9NZQ3 722 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 GULP1Q9UBP9 304 aa15.91■□□□□ 0.14
VAMP1-205ENST00000535927 NOVA2Q9UNW9 492 aaKnown RBP15.91■□□□□ 0.14
VAMP1-205ENST00000535927 ARHGEF17Q96PE2 2063 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-205ENST00000535927 KIR2DS5A0A0G2JLQ3 304 aa15.9■□□□□ 0.14
VAMP1-205ENST00000535927 A0A0G2JNG1 304 aa15.9■□□□□ 0.14
VAMP1-205ENST00000535927 SMIM23A6NLE4 172 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms