RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 C1orf232A0A0U1RR37 186 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 LSM1O15116 133 aaKnown RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 ACOX3O15254 700 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 ABLIM3O94929 683 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 RASAL1O95294 804 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 TRIM16O95361 564 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 MYF6P23409 242 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 HTR1EP28566 365 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 RGS4P49798 205 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 SPRED1Q7Z699 444 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 MILR1Q7Z6M3 343 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 PROSER1Q86XN7 944 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 PIH1D2Q8WWB5 315 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 BIRC7Q96CA5 298 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 SLC22A12Q96S37 553 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 EGFL8Q99944 293 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 APOL5Q9BWW9 433 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 RPF2Q9H7B2 306 aaKnown RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 TMEM45AQ9NWC5 275 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 GNPTGQ9UJJ9 305 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 ASLP04424 464 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 HRH2P25021 359 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 CA5AP35218 305 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 DGKQP52824 942 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 OR4D2P58180 307 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 AP1S1P61966 158 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 TUBA4AP68366 448 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 PLIN5Q00G26 463 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 RBFAQ8N0V3 343 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 DPP10Q8N608 796 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 LKAAEAR1Q8TD35 194 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 PXYLP1Q8TE99 480 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 NUDT8Q8WV74 236 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 TRMT2BQ96GJ1 504 aaKnown RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 VPS50Q96JG6 964 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 RNF145Q96MT1 663 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 FAM126AQ9BYI3 521 aaPredicted RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 RSL24D1Q9UHA3 163 aaKnown RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 EVLQ9UI08 416 aaPredicted RBP12.95□□□□□ -0.34
LDLR-203ENST00000535915 STOML2Q9UJZ1 356 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 ANGPTL3Q9Y5C1 460 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 OR51B4Q9Y5P0 310 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 ST14Q9Y5Y6 855 aa12.95□□□□□ -0.34
LDLR-203ENST00000535915 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 PRRG1O14668 218 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SLC25A14O95258 325 aaPredicted RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 EFEMP2O95967 443 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 LDLRP01130 860 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 PCSK6P29122 969 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SLC5A2P31639 672 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 ALDH3B2P48448 385 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 CCL23P55773 120 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 MTPNP58546 118 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SFSWAPQ12872 951 aaKnown RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 TRAF3Q13114 568 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 AAK1Q2M2I8 961 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 RFTN2Q52LD8 501 aaPredicted RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 GLYATQ6IB77 296 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 PDPRQ8NCN5 879 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 MAGEE2Q8TD90 523 aaPredicted RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 NSMCE2Q96MF7 247 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 ACTL8Q9H568 366 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 PRSS21Q9Y6M0 314 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 A8MX80 341 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 GAPDHSO14556 408 aaPredicted RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 TAPBPO15533 448 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SMAD6O43541 496 aaKnown RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 CLIC3O95833 236 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 BMP1P13497 986 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 ITGALP20701 1170 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 GKP32189 559 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 RPL38P63173 70 aaKnown RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 BCL2L1Q07817 233 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 NFATC2Q13469 925 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 DLEU7Q6UYE1 221 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 SNX20Q7Z614 316 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 DNAJB7Q7Z6W7 309 aaPredicted RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 APCDD1Q8J025 514 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 DCAF4L2Q8NA75 395 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 PAPD5Q8NDF8 572 aaKnown RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 TNIP2Q8NFZ5 429 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 ISG20Q96AZ6 181 aaKnown RBP12.94□□□□□ -0.34
LDLR-203ENST00000535915 C17orf80Q9BSJ5 609 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 C8orf4Q9NR00 106 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 ELOVL2Q9NXB9 296 aa12.94□□□□□ -0.34
LDLR-203ENST00000535915 FFAR3O14843 346 aa12.93□□□□□ -0.34
LDLR-203ENST00000535915 GPR42O15529 346 aa12.93□□□□□ -0.34
LDLR-203ENST00000535915 PQBP1O60828 265 aaKnown RBP12.93□□□□□ -0.34
LDLR-203ENST00000535915 RSL1D1O76021 490 aaKnown RBP12.93□□□□□ -0.34
LDLR-203ENST00000535915 CLDN7O95471 211 aa12.93□□□□□ -0.34
LDLR-203ENST00000535915 SLC2A4P14672 509 aa12.93□□□□□ -0.34
LDLR-203ENST00000535915 UGT1A1P22309 533 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms