RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 SNX20Q7Z614 316 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 C17orf64Q86WR6 236 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ZNF395Q9H8N7 513 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 DNAJB4Q9UDY4 337 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 SQORQ9Y6N5 450 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 GLI3P10071 1580 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 CAPN8A6NHC0 703 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 PER2O15055 1255 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 DNTTP04053 509 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 TLX1P31314 330 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 KIR3DL1P43629 444 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 PSMD4P55036 377 aaKnown RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 PLA2G4EQ3MJ16 856 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 TRIM40Q6P9F5 258 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 RALGPS2Q86X27 583 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 ZNF655Q8N720 491 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 RHBGQ9H310 441 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ADGRE2Q9UHX3 823 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 IQCF5A8MTL0 148 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 HAT1O14929 419 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 APODP05090 189 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 CLTBP09497 229 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 DGKGP49619 791 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 SKP1P63208 163 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ZFP69Q49AA0 526 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 GPRIN1Q7Z2K8 1008 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 COL26A1Q96A83 441 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ROPN1LQ96C74 230 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 SLC47A1Q96FL8 570 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 REXO5Q96IC2 774 aaKnown RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 HERPUD2Q9BSE4 406 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ISM1B1AKI9 464 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 TYROBPO43914 113 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 SLC10A3P09131 477 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 IFNGR2P38484 337 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 PSMD8P48556 350 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 NDUFAF6Q330K2 333 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 PSAT1Q9Y617 370 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 A8MT66 165 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 H0Y858 1186 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ETS2P15036 469 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ITGA2P17301 1181 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 SLC26A3P40879 764 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 IDH2P48735 452 aaKnown RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 SLC10A2Q12908 348 aaPredicted RBP17■□□□□ 0.31
PHRF1-206ENST00000534320 C14orf80Q86SX3 495 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 IZUMO1Q8IYV9 350 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 ZHX1-C8orf76Q96EF9 292 aa17■□□□□ 0.31
PHRF1-206ENST00000534320 MYADML2A6NDP7 307 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 SSNA1O43805 119 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 NIPSNAP2O75323 286 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 FYNP06241 537 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 LIPEQ05469 1076 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 ZNF461Q8TAF7 563 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 C1orf74Q96LT6 269 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 MUC13Q9H3R2 512 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 LOC100506127A0A0U1RQW1 187 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 RBM47A0AV96 593 aaKnown RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 DLX3O60479 287 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 CCNKO75909 580 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 CHRNA1P02708 482 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 EDN1P05305 212 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 GATMP50440 423 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TYSND1Q2T9J0 566 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 LIN54Q6MZP7 749 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 BHLHB9Q6PI77 547 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 OFCC1Q8IZS5 231 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 BPIFB6Q8NFQ5 453 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 OR4A15Q8NGL6 344 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TSGA13Q96PP4 275 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 PHPT1Q9NRX4 125 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 IMP3Q9NV31 184 aaKnown RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 ZNF222Q9UK12 451 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 ZNF221Q9UK13 617 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 GMPPBQ9Y5P6 360 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 PRKCGP05129 697 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 IVDP26440 423 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 GJA5P36382 358 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 CSNK2BP67870 215 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 RAB6CQ53S08 254 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 BEND7Q8N7W2 519 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 MNTQ99583 582 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 PAAF1Q9BRP4 392 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 RAB6CQ9H0N0 254 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 EPB41L1Q9H4G0 881 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TRNAU1APQ9NX07 287 aaKnown RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 PFDN2Q9UHV9 154 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 BAIAP2Q9UQB8 552 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 POMPQ9Y244 141 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 SAMHD1Q9Y3Z3 626 aaKnown RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TBC1D3DA0A087WVF3 549 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TBC1D3IA0A087WXS9 549 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TBC1D3EA0A087X179 549 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TBC1D3KA0A087X1G2 549 aa16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TBC1D3FA6NER0 549 aaPredicted RBP16.99■□□□□ 0.31
PHRF1-206ENST00000534320 TBC1D3LB9A6J9 549 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms