RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PARP6Q2NL67 630 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 DEFB109BQ30KR1 87 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
COPB1-211ENST00000534234 BCL7AQ4VC05 210 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
COPB1-211ENST00000534234 CYB5D1Q6P9G0 228 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 ARHGEF18Q6ZSZ5 1173 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 PEX26Q7Z412 305 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 PTRH1Q86Y79 214 aaKnown RBP8.7□□□□□ -1.02
COPB1-211ENST00000534234 NXPE1Q8N323 547 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 UBL4BQ8N7F7 174 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 FAM71DQ8N9W8 422 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 ULK4Q96C45 1275 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 STAMBPL1Q96FJ0 436 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 SLC41A2Q96JW4 573 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 LINC00615Q96LM1 132 aaPredicted RBP8.7□□□□□ -1.02
COPB1-211ENST00000534234 COPS8Q99627 209 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
COPB1-211ENST00000534234 C19orf43Q9BQ61 176 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 TRIM4Q9C037 500 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 CLMPQ9H6B4 373 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 FEZ2Q9UHY8 353 aaPredicted RBP8.7□□□□□ -1.02
COPB1-211ENST00000534234 SLC24A2Q9UI40 661 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 TUBD1Q9UJT1 453 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 RARRES3Q9UL19 164 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 PADI1Q9ULC6 663 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 MRPS18BQ9Y676 258 aaKnown RBP8.7□□□□□ -1.02
COPB1-211ENST00000534234 COLEC10Q9Y6Z7 277 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 SCN8AQ9UQD0 1980 aa8.7□□□□□ -1.02
COPB1-211ENST00000534234 OR6C74A6NCV1 312 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 GOLGA6L3A6NEY3 463 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 MIF4GDA9UHW6 222 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 CFAP99D6REC4 459 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 CCL22O00626 93 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 LDB2O43679 373 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KATNA1O75449 491 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 MT-ND3P03897 115 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 SLC35G4P0C7Q5 338 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 ATP1B2P14415 290 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 TPH1P17752 444 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 MC4RP32245 332 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 HSD11B2P80365 405 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 ACY1Q03154 408 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 TUBB3Q13509 450 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 ERV3-1Q14264 604 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KRT33BQ14525 404 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KCNAB1Q14722 419 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 GPR33Q49SQ1 333 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 DNTTIP2Q5QJE6 756 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 ATP1A1-AS1Q5TC04 95 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 CAPRIN2Q6IMN6 1127 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 PWWP2BQ6NUJ5 590 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 ARMC6Q6NXE6 501 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 DUS1LQ6P1R4 473 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 CERS6Q6ZMG9 384 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 SNX20Q7Z614 316 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 BPHLQ86WA6 291 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 OOSP2Q86WS3 158 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 SYCE1Q8N0S2 351 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 LILRA3Q8N6C8 439 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 HEXDCQ8WVB3 486 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 APOBEC4Q8WW27 367 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 FCRL4Q96PJ5 515 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 CD180Q99467 661 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 CCM2Q9BSQ5 444 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KIR3DX1Q9H7L2 352 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 FGF21Q9NSA1 209 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KCND3Q9UK17 655 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 CROTQ9UKG9 612 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 PACSIN2Q9UNF0 486 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 C17orf113A0A1B0GUU1 675 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 TLCD2A6NGC4 264 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 TERTO14746 1132 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 TIAF1O95411 115 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 METTL18O95568 372 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 FTCDO95954 541 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 NTRK1P04629 796 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 EBLN1P0CF75 366 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 NDUFS1P28331 727 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 PRLHRP49683 370 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 CDKN1CP49918 316 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 CSRP3P50461 194 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 ZNF140P52738 457 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 ZRANB3Q5FWF4 1079 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KCTD11Q693B1 232 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 TAS2R42Q7RTR8 314 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 SERPINA9Q86WD7 417 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 GAS2L3Q86XJ1 694 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KMT5CQ86Y97 462 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 KLHDC8BQ8IXV7 354 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 TXLNBQ8N3L3 684 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 OR4E2Q8NGC2 313 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 HM13Q8TCT9 377 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 ABHD17AQ96GS6 310 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 DNAJC1Q96KC8 554 aaKnown RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 RMDN2Q96LZ7 410 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 AKIRIN1Q9H9L7 192 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 LHX9Q9NQ69 397 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms