RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CAPZBP47756 277 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 KPNA2P52292 529 aaKnown RBP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 EPHA4P54764 986 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 FOXM1Q08050 763 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 PRKG2Q13237 762 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 TRA2AQ13595 282 aaKnown RBP eCLIP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 GTF2H3Q13889 308 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 PRPSAP1Q14558 356 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 RPS6KA1Q15418 735 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 GPR19Q15760 415 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 BCL7AQ4VC05 210 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 MANEAQ5SRI9 462 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 CACHD1Q5VU97 1274 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 BROXQ5VW32 411 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 FAM199XQ6PEV8 388 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 SNX20Q7Z614 316 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 TRIM73Q86UV7 250 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 SYCE1Q8N0S2 351 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 AGGF1Q8N302 714 aaeCLIP9.4□□□□□ -0.92e-6■□□□□ 9.7
SSBP3-215ENST00000533946 RNF10Q8N5U6 811 aaKnown RBP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 PRELID2Q8N945 189 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 SLC38A9Q8NBW4 561 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 OR4E2Q8NGC2 313 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 OR2L2Q8NH16 312 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 DTX3LQ8TDB6 740 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 HDAC10Q969S8 669 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 TTC25Q96NG3 672 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 OR6C1Q96RD1 312 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 OR52A5Q9H2C5 316 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 COG4Q9H9E3 785 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 CASS4Q9NQ75 786 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 CHRAC1Q9NRG0 131 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 RAB6BQ9NRW1 208 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 ZDHHC3Q9NYG2 299 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 IL1RAPL1Q9NZN1 696 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 SLC24A2Q9UI40 661 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 TTC7AQ9ULT0 858 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-215ENST00000533946 PPP2R2CQ9Y2T4 447 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 PCDHGA3Q9Y5H0 932 aa9.4□□□□□ -0.9
SSBP3-215ENST00000533946 MED13Q9UHV7 2174 aa9.4□□□□□ -0.91
SSBP3-215ENST00000533946 TNRC6AQ8NDV7 1962 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 OR5K4A6NMS3 321 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 USP27XA6NNY8 438 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 GOLGA8KD6RF30 607 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 GOLGA8TH3BQL2 631 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 CEP104O60308 925 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 RASSF9O75901 435 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 STK17BO94768 372 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 STK10O94804 968 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 CRTAMO95727 393 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 DLGAP3O95886 979 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 GOT2P00505 430 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 FGGP02679 453 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 NTRK1P04629 796 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 PTMAP06454 111 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 ATXN8OSP0DMR3 200 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 PRKAR1AP10644 381 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 ATP1B2P14415 290 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 PSMA3P25788 255 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 MSNP26038 577 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 NMBRP28336 390 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 PRLHRP49683 370 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 VPS41P49754 854 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 SESN2P58004 480 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 ITGA9Q13797 1035 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 PWWP2BQ6NUJ5 590 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 CACNA2D3Q8IZS8 1091 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 KRT222Q8N1A0 295 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 MPP5Q8N3R9 675 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 OR5AR1Q8NGP9 310 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 COG1Q8WTW3 980 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 KLHL6Q8WZ60 621 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 SRPK1Q96SB4 655 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 COPS8Q99627 209 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 DDA1Q9BW61 102 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF768Q9H5H4 540 aaKnown RBP9.39□□□□□ -0.91
SSBP3-215ENST00000533946 LRRC40Q9H9A6 602 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 UCK1Q9HA47 277 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 FBXO8Q9NRD0 319 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 SPHK1Q9NYA1 384 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 GALPQ9UBC7 116 aa9.39□□□□□ -0.91
SSBP3-215ENST00000533946 GOLGA6L9A6NEM1 432 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 OR5K3A6NET4 321 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 STMND1H3BQB6 276 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 H7C0S8 307 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 BTN3A1O00481 513 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 TERTO14746 1132 aaKnown RBP9.38□□□□□ -0.91
SSBP3-215ENST00000533946 ZNF185O15231 689 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 FANCGO15287 622 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 KIAA0754O94854 1291 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 SUN1O94901 812 aa9.38□□□□□ -0.91
SSBP3-215ENST00000533946 APRTP07741 180 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms