RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 KSR1Q8IVT5 923 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SMG7Q92540 1137 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 ELMO3Q96BJ8 720 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MECRQ9BV79 373 aa4□□□□□ -1.77
SOX6-217ENST00000533870 C1QTNF3Q9BXJ4 246 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZYG11BQ9C0D3 744 aa4□□□□□ -1.77
SOX6-217ENST00000533870 XYLT2Q9H1B5 865 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ACP6Q9NPH0 428 aa4□□□□□ -1.77
SOX6-217ENST00000533870 GTF2IRD1Q9UHL9 959 aa4□□□□□ -1.77
SOX6-217ENST00000533870 USP21Q9UK80 565 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TRAPPC4Q9Y296 219 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PCDHAC2Q9Y5I4 1007 aa4□□□□□ -1.77
SOX6-217ENST00000533870 IRAK3Q9Y616 596 aa4□□□□□ -1.77
SOX6-217ENST00000533870 KCPQ6ZWJ8 1503 aa4□□□□□ -1.77
SOX6-217ENST00000533870 A0A096LPI6 279 aa4□□□□□ -1.77
SOX6-217ENST00000533870 LACTBL1A8MY62 500 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PTGES3LE9PB15 166 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CCRL2O00421 344 aa4□□□□□ -1.77
SOX6-217ENST00000533870 BTN3A1O00481 513 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SLC16A5O15375 505 aa4□□□□□ -1.77
SOX6-217ENST00000533870 IRAK2O43187 625 aa4□□□□□ -1.77
SOX6-217ENST00000533870 RSL1D1O76021 490 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 SMIM18P0DKX4 95 aa4□□□□□ -1.77
SOX6-217ENST00000533870 LCP1P13796 627 aa4□□□□□ -1.77
SOX6-217ENST00000533870 GGT1P19440 569 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MLLT3P42568 568 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 SRP54P61011 504 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 ADAM17P78536 824 aa4□□□□□ -1.77
SOX6-217ENST00000533870 RCAN2Q14206 197 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PLCL1Q15111 1095 aa4□□□□□ -1.77
SOX6-217ENST00000533870 PTPRNQ16849 979 aa4□□□□□ -1.77
SOX6-217ENST00000533870 SYVN1Q86TM6 617 aa4□□□□□ -1.77
SOX6-217ENST00000533870 KIF18BQ86Y91 864 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CDK20Q8IZL9 346 aa4□□□□□ -1.77
SOX6-217ENST00000533870 CERS5Q8N5B7 392 aa4□□□□□ -1.77
SOX6-217ENST00000533870 LRRC20Q8TCA0 184 aa4□□□□□ -1.77
SOX6-217ENST00000533870 C2orf15Q8WU43 125 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 DNAJB3Q8WWF6 145 aa4□□□□□ -1.77
SOX6-217ENST00000533870 VPS35Q96QK1 796 aa4□□□□□ -1.77
SOX6-217ENST00000533870 ZNF607Q96SK3 696 aa4□□□□□ -1.77
SOX6-217ENST00000533870 TSEN34Q9BSV6 310 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 C2orf49Q9BVC5 232 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 NPLQ9BXD5 320 aaPredicted RBP4□□□□□ -1.77
SOX6-217ENST00000533870 SLITRK2Q9H156 845 aa4□□□□□ -1.77
SOX6-217ENST00000533870 MGAT4BQ9UQ53 548 aa4□□□□□ -1.77
SOX6-217ENST00000533870 EXOSC1Q9Y3B2 195 aaKnown RBP4□□□□□ -1.77
SOX6-217ENST00000533870 PCDHGA11Q9Y5H2 935 aa4□□□□□ -1.77
SOX6-217ENST00000533870 KRBA1A5PL33 1030 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 EFCAB9A8MZ26 197 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 HNRNPCL2B2RXH8 293 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 INMT-MINDY4F8WBC2 141 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 C9P02748 559 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 GSTM1P09488 218 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 CNPP09543 421 aaKnown RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 BAG6P46379 1132 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 GSTM5P46439 218 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 GPR15P49685 360 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 ERFP50548 548 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 RORCP51449 518 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 EMP3P54852 163 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 RALGDSQ12967 914 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 SLC9B1Q4ZJI4 515 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 C6orf136Q5SQH8 315 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 UNC5DQ6UXZ4 953 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 DPP9Q86TI2 863 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 ZSWIM9Q86XI8 627 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 SPPL2CQ8IUH8 684 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 SYT12Q8IV01 421 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 PHYHIPQ92561 330 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 MFSD3Q96ES6 412 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 BTN2A3PQ96KV6 586 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 COPS8Q99627 209 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 TMEM246Q9BRR3 403 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 SPON2Q9BUD6 331 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 TMEM39AQ9NV64 488 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 SPASTQ9UBP0 616 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 OAS3Q9Y6K5 1087 aaKnown RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 MON2Q7Z3U7 1717 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 TISP43B9A030 160 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 G3V2L1 256 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 DFFAO00273 331 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 DYNC1LI2O43237 492 aaPredicted RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 SLC28A2O43868 658 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 DNAJB6O75190 326 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 IL1AP01583 271 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 RPN2P04844 631 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 CBSLP0DN79 551 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 JUNDP17535 347 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 EFNA1P20827 205 aaPredicted RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 RPS3P23396 243 aaKnown RBP eCLIP3.99□□□□□ -1.77
SOX6-217ENST00000533870 CBSP35520 551 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 IDH2P48735 452 aaKnown RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 RING1Q06587 406 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 NME3Q13232 169 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 ZNF177Q13360 481 aaPredicted RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 TUBB3Q13509 450 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 LAPTM5Q13571 262 aa3.99□□□□□ -1.77
SOX6-217ENST00000533870 TTLL12Q14166 644 aaPredicted RBP3.99□□□□□ -1.77
SOX6-217ENST00000533870 KCTD19Q17RG1 926 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms