RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PPARGP37231 505 aaPredicted RBP20■□□□□ 0.79
CCS-208ENST00000533244 TTPAP49638 278 aa20■□□□□ 0.79
CCS-208ENST00000533244 DHX34Q14147 1143 aaKnown RBP20■□□□□ 0.79
CCS-208ENST00000533244 C16orf72Q14CZ0 275 aa20■□□□□ 0.79
CCS-208ENST00000533244 TBC1D25Q3MII6 688 aa20■□□□□ 0.79
CCS-208ENST00000533244 RAB11FIP2Q7L804 512 aa20■□□□□ 0.79
CCS-208ENST00000533244 AHCYL2Q96HN2 611 aaKnown RBP20■□□□□ 0.79
CCS-208ENST00000533244 CCDC74BQ96LY2 380 aa20■□□□□ 0.79
CCS-208ENST00000533244 TRIM56Q9BRZ2 755 aaKnown RBP20■□□□□ 0.79
CCS-208ENST00000533244 ANAPC5Q9UJX4 755 aa20■□□□□ 0.79
CCS-208ENST00000533244 MN1Q10571 1320 aaPredicted RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 HGSO14964 777 aaPredicted RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 TTI1O43156 1089 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 POLBP06746 335 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 OR56A5P0C7T3 313 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 TYSND1Q2T9J0 566 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 ANKRD20A4Q4UJ75 823 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 PHF19Q5T6S3 580 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 IZUMO3Q5VZ72 239 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 CASC4Q6P4E1 433 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 LDB1Q86U70 411 aaPredicted RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 SNIP1Q8TAD8 396 aaKnown RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 ZFPM2Q8WW38 1151 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 C12orf66Q96MD2 445 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 ZNF578Q96N58 590 aaPredicted RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 SLC46A1Q96NT5 459 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 FCRL3Q96P31 734 aaPredicted RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 P2RY12Q9H244 342 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 IMP3Q9NV31 184 aaKnown RBP19.99■□□□□ 0.79
CCS-208ENST00000533244 SAMD15Q9P1V8 674 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 CELSR3Q9NYQ7 3312 aa19.99■□□□□ 0.79
CCS-208ENST00000533244 ZCWPW2A0A1B0GU75 182 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 SRRM3A6NNA2 597 aaPredicted RBP19.98■□□□□ 0.79
CCS-208ENST00000533244 CDRT15L2A8MXV6 281 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 LIN7AO14910 233 aaPredicted RBP19.98■□□□□ 0.79
CCS-208ENST00000533244 TLX3O43711 291 aaPredicted RBP19.98■□□□□ 0.79
CCS-208ENST00000533244 UBXN7O94888 489 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 CD151P48509 253 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 ERVPABLB-1P60509 514 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 DUS1LQ6P1R4 473 aaKnown RBP19.98■□□□□ 0.79
CCS-208ENST00000533244 FBXO39Q8N4B4 442 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 SPATA4Q8NEY3 305 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 NCSTNQ92542 709 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 TRIM51Q9BSJ1 452 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.98■□□□□ 0.79
CCS-208ENST00000533244 LOXL2Q9Y4K0 774 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 CFAP20Q9Y6A4 193 aaKnown RBP19.98■□□□□ 0.79
CCS-208ENST00000533244 PKD1L2Q7Z442 2459 aa19.98■□□□□ 0.79
CCS-208ENST00000533244 SLC5A10A0PJK1 596 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 F8W8V4 182 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 PRMT5O14744 637 aaPredicted RBP19.97■□□□□ 0.79
CCS-208ENST00000533244 C9P02748 559 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 ITGA2BP08514 1039 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 PAMP19021 973 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 PDHA2P29803 388 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 CAPZBP47756 277 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 MORF4L2Q15014 288 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 CLEC14AQ86T13 490 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 ZNF669Q96BR6 464 aaPredicted RBP19.97■□□□□ 0.79
CCS-208ENST00000533244 KRT12Q99456 494 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 CMKLR1Q99788 373 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 CARD6Q9BX69 1037 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 RAXQ9Y2V3 346 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 RPS6KL1Q9Y6S9 549 aa19.97■□□□□ 0.79
CCS-208ENST00000533244 SMAPO00193 183 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 TP73O15350 636 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 USP1O94782 785 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 HGFP14210 728 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 OGNP20774 298 aaKnown RBP19.96■□□□□ 0.79
CCS-208ENST00000533244 RPS3P23396 243 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCS-208ENST00000533244 MAPK9P45984 424 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 PREPP48147 710 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 MRNIPQ6NTE8 343 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 HIBCHQ6NVY1 386 aaPredicted RBP19.96■□□□□ 0.79
CCS-208ENST00000533244 ZNF572Q7Z3I7 529 aaPredicted RBP19.96■□□□□ 0.79
CCS-208ENST00000533244 ARHGAP22Q7Z5H3 698 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 PDZD3Q86UT5 571 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 LRRC6Q86X45 466 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 RCBTB1Q8NDN9 531 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 LKAAEAR1Q8TD35 194 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 ELMO1Q92556 727 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 RSC1A1Q92681 617 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 FGF11Q92914 225 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 TCF12Q99081 682 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 RAB33BQ9H082 229 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 KIR3DX1Q9H7L2 352 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 THSD1Q9NS62 852 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 EPHA6Q9UF33 1036 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 HEBP2Q9Y5Z4 205 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 LAMA5O15230 3695 aa19.96■□□□□ 0.79
CCS-208ENST00000533244 GOLGA8KD6RF30 607 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 GOLGA8TH3BQL2 631 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 SEC31AO94979 1220 aaKnown RBP19.95■□□□□ 0.78
CCS-208ENST00000533244 TNFSF15O95150 251 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 TYRP1P17643 537 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 MPSTP25325 297 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 NDUFS1P28331 727 aa19.95■□□□□ 0.78
CCS-208ENST00000533244 RBMS1P29558 406 aaKnown RBP19.95■□□□□ 0.78
CCS-208ENST00000533244 PLOD1Q02809 727 aaPredicted RBP19.95■□□□□ 0.78
CCS-208ENST00000533244 MSS51Q4VC12 460 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms