RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PWWP2BQ6NUJ5 590 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 RANBP10Q6VN20 620 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 OOSP2Q86WS3 158 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 CFAP206Q8IYR0 622 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 OR13C4Q8NGS5 318 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 CCDC110Q8TBZ0 833 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 SLC41A2Q96JW4 573 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 GORASP1Q9BQQ3 440 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 TWSG1Q9GZX9 223 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 FAM96AQ9H5X1 160 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 EPN1Q9Y6I3 576 aaPredicted RBP17.4■□□□□ 0.38
PCF11-206ENST00000533018 DUSP10Q9Y6W6 482 aa17.4■□□□□ 0.38
PCF11-206ENST00000533018 CCDC66A2RUB6 948 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 OR5K3A6NET4 321 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 PJA2O43164 708 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 TJP3O95049 919 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 NTRK1P04629 796 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 ADRA1AP35348 466 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 DNASE1L3Q13609 305 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 SPARCL1Q14515 664 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 LACTB2Q53H82 288 aaPredicted RBP17.39■□□□□ 0.37
PCF11-206ENST00000533018 CERS6Q6ZMG9 384 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
PCF11-206ENST00000533018 CALR3Q96L12 384 aaKnown RBP17.39■□□□□ 0.37
PCF11-206ENST00000533018 TBL1YQ9BQ87 522 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 EPN3Q9H201 632 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 LHX9Q9NQ69 397 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 FGF21Q9NSA1 209 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 SOHLH2Q9NX45 425 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 ANAPC2Q9UJX6 822 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 POLHQ9Y253 713 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 EFR3BQ9Y2G0 817 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 KCNMB2Q9Y691 235 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 COLEC10Q9Y6Z7 277 aa17.39■□□□□ 0.37
PCF11-206ENST00000533018 KLHL33A6NCF5 533 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 RCCD1A6NED2 376 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 TLCD2A6NGC4 264 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 FURINP09958 794 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 PYGMP11217 842 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 ITGALP20701 1170 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 ARCN1P48444 511 aaKnown RBP17.38■□□□□ 0.37
PCF11-206ENST00000533018 HSD11B2P80365 405 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 PRKAA1Q13131 559 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 TMTC4Q5T4D3 741 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 AADACL2Q6P093 401 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 TMEM135Q86UB9 458 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 BPHLQ86WA6 291 aaPredicted RBP17.38■□□□□ 0.37
PCF11-206ENST00000533018 KMT5CQ86Y97 462 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 TMTC1Q8IUR5 882 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 CT55Q8WUE5 264 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 ZFPM2Q8WW38 1151 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 ULK4Q96C45 1275 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 SPATA13Q96N96 652 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 PPP1R2P1Q96PQ5 205 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 PANX2Q96RD6 677 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 CD180Q99467 661 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 COPS8Q99627 209 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 SLC24A2Q9UI40 661 aa17.38■□□□□ 0.37
PCF11-206ENST00000533018 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 CFAP99D6REC4 459 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 MKRN2OSH3BPM6 223 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 CCL22O00626 93 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 CREG1O75629 220 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 ATP1B2P14415 290 aaPredicted RBP17.37■□□□□ 0.37
PCF11-206ENST00000533018 HADHAP40939 763 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 CASRP41180 1078 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 XIAPP98170 497 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 GPR19Q15760 415 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 BCL7AQ4VC05 210 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 COLEC12Q5KU26 742 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 FAM199XQ6PEV8 388 aaPredicted RBP17.37■□□□□ 0.37
PCF11-206ENST00000533018 SNX20Q7Z614 316 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 TMEM126BQ8IUX1 230 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
PCF11-206ENST00000533018 OR4E2Q8NGC2 313 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 FCRL4Q96PJ5 515 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 FERD3LQ96RJ6 166 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 CCM2Q9BSQ5 444 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 KIR3DX1Q9H7L2 352 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 SEMA5BQ9P283 1151 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 TP53TG5Q9Y2B4 290 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 RELNP78509 3460 aa17.37■□□□□ 0.37
PCF11-206ENST00000533018 SPTBP11277 2137 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 GSAPA4D1B5 854 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 C21orf140B9A014 251 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 SCRG1O75711 98 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 ZBTB11O95625 1053 aaPredicted RBP17.36■□□□□ 0.37
PCF11-206ENST00000533018 POLR2CP19387 275 aaPredicted RBP17.36■□□□□ 0.37
PCF11-206ENST00000533018 MC4RP32245 332 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 PTPN7P35236 360 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 RPS15P62841 145 aaKnown RBP17.36■□□□□ 0.37
PCF11-206ENST00000533018 TUBB4BP68371 445 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 TUBB2AQ13885 445 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 ZRANB3Q5FWF4 1079 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 FBXO38Q6PIJ6 1188 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 ARHGEF18Q6ZSZ5 1173 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 TAS2R42Q7RTR8 314 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 NXPE1Q8N323 547 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 D2HGDHQ8N465 521 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms