RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CLEC1AQ8NC01 280 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 OR1L3Q8NH93 324 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 SPATA22Q8NHS9 363 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 TRAF3IP1Q8TDR0 691 aaPredicted RBP9□□□□□ -0.97
NEDD8-206ENST00000531430 ADAMTS17Q8TE56 1095 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 NAT14Q8WUY8 206 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 FER1L6-AS2Q96M78 137 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 FERD3LQ96RJ6 166 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 SMAD5Q99717 465 aaKnown RBP9□□□□□ -0.97
NEDD8-206ENST00000531430 ISCUQ9H1K1 167 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 DEF6Q9H4E7 631 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 AGPAT4Q9NRZ5 378 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 IRAK4Q9NWZ3 460 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 CHMP5Q9NZZ3 219 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 SEMA5BQ9P283 1151 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 C5AR2Q9P296 337 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 ITGB1BP2Q9UKP3 347 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 TMPRSS11EQ9UL52 423 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 PTRH2Q9Y3E5 179 aaKnown RBP9□□□□□ -0.97
NEDD8-206ENST00000531430 SPO11Q9Y5K1 396 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 COLEC10Q9Y6Z7 277 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 POLQO75417 2590 aa9□□□□□ -0.97
NEDD8-206ENST00000531430 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 PRSS44E7EML9 344 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 E7EQ34 232 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 ZNF749O43361 778 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 HNRNPRO43390 633 aaKnown RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SLC35G4P0C7Q5 338 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 HLA-DPA1P20036 260 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 LMAN1P49257 510 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 ARSEP51690 589 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 CTSCP53634 463 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 TAS2R40P59535 323 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 ADCY2Q08462 1091 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 ABRQ12979 859 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 LAMB3Q13751 1172 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SLC9A5Q14940 896 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 PDK2Q15119 407 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 NOMO1Q15155 1222 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 ODF2Q5BJF6 829 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 VWA5B1Q5TIE3 1220 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 E4F1Q66K89 784 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 TICAM1Q8IUC6 712 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SLC34A3Q8N130 599 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 GALNT16Q8N428 558 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 PQLC3Q8N755 202 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SPDYE1Q8NFV5 336 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 BLOC1S5Q8TDH9 187 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 CPLX3Q8WVH0 158 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 TM9SF4Q92544 642 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 HDAC11Q96DB2 347 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 IMP4Q96G21 291 aaKnown RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 VPS35Q96QK1 796 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 UNKQ9C0B0 810 aaKnown RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 ZCCHC2Q9C0B9 1178 aaKnown RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SLC25A51Q9H1U9 297 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SRMSQ9H3Y6 488 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 RUBCNLQ9H714 662 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
NEDD8-206ENST00000531430 PCMTD2Q9NV79 361 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 CTTNBP2NLQ9P2B4 639 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SLC24A2Q9UI40 661 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 PADI2Q9Y2J8 665 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SEC16AO15027 2179 aa8.99□□□□□ -0.97
NEDD8-206ENST00000531430 SPENQ96T58 3664 aaKnown RBP8.98□□□□□ -0.97
NEDD8-206ENST00000531430 GLYATL1P3A0A0U1RQE8 302 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 GPR39O43194 453 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 NDST3O95803 873 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 TNNT1P13805 278 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 PRF1P14222 555 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 PVRP15151 417 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 KDELR1P24390 212 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 ITGA3P26006 1051 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 SPAM1P38567 509 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 FOLR3P41439 243 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 PRKCIP41743 596 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 PER3P56645 1201 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 DYNLT1P63172 113 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 SSPNQ14714 243 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 MYBPC3Q14896 1274 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 NCF4Q15080 339 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 STX1AQ16623 288 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 LONRF2Q1L5Z9 754 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 LDLRAP1Q5SW96 308 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 GPRC6AQ5T6X5 926 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 METRNLQ641Q3 311 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 NPNTQ6UXI9 565 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 APTXQ7Z2E3 356 aaKnown RBP8.98□□□□□ -0.97
NEDD8-206ENST00000531430 RFX6Q8HWS3 928 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 GPR135Q8IZ08 494 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 NIPA2Q8N8Q9 360 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 PHC3Q8NDX5 983 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 DNAJB14Q8TBM8 379 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 FAM71BQ8TC56 605 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 LCN9Q8WX39 176 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 RAPGEF5Q92565 580 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 FATE1Q969F0 183 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 CNDP1Q96KN2 507 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 LRFN5Q96NI6 719 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 RNF157Q96PX1 679 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms